UPGMA

UPGMA clustering of constructing phylogenetic relationships implemented from scratch

About

Implementation of UPGMA clustering algorithms for given nucleotide and protien alignments.

python s11.py
python s12.py
python s21.py
python s22.py

Further details about the implementation can be found out at A2_Bio.pdf

Numpy Pandas

Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
A2_Bio.pdf		A2_Bio.pdf
BLOSUM62.txt		BLOSUM62.txt
LICENSE		LICENSE
Ndistance.csv		Ndistance.csv
Nucleotide.txt		Nucleotide.txt
Nucleotide_alignment.txt		Nucleotide_alignment.txt
Pdistance.csv		Pdistance.csv
Protein.txt		Protein.txt
Protein_alignment.txt		Protein_alignment.txt
README.md		README.md
a12.txt		a12.txt
a22.txt		a22.txt
s11.py		s11.py
s12.py		s12.py
s21.py		s21.py
s22.py		s22.py