sort out miseq headers with zeros

nickp60 · Sep 27, 2023 · 4de1e48 · 4de1e48
1 parent 1ea9be4
commit 4de1e48
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Showing 3 changed files with 5 additions and 1 deletion.
diff --git a/fcid/run.py b/fcid/run.py
@@ -59,6 +59,7 @@
 
 
 def get_tech_type(flowcell, d):
+ flowcell = flowcell.replace("000000000-", "")
  for pattern, value in d:
  if re.search(pattern, flowcell):
  return value

diff --git a/fcid/test_fcid.py b/fcid/test_fcid.py
@@ -7,3 +7,6 @@ def test_by_machine(capsys):
 
 def test_by_flowcell():
  assert get_tech_type("22C37GLT3", FCIDs)[0] == ["NovaSeq X"]
+
+def test_by_flowcell_weird_zeros():
+ assert get_tech_type("000000000-BLW8J", FCIDs)[0] == ["MiSeq"]
diff --git a/pyproject.toml b/pyproject.toml
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "fcid"
-version = "0.0.3"
+version = "0.0.4"
 authors = [
  {name = "Nick Waters", email = "nickp60@gmail.com"},
 ]