0.5.0rc0

A new minor release going forward with some of the items of our roadmap.
The most salient features are the integration of FSL Eddy and the adoption of the new *SDCFlows 2.0*
API.

CHANGES
-------

* FIX: Change in _svgutils_ API (0.3.2) breaks our reportlet generation (#151)
* FIX: Correctly check *SDCFlows*' registry of ``IntendedFor`` files (#141)
* FIX: Honor ``--nprocs`` flag (#142)
* ENH: Temporary integration of FSL Eddy (#144)
* ENH: Connect fieldmap estimation to preprocessing pipeline of individual DWI runs (#140)
* ENH: Refactor workflow for simplicity - explicit iteration over DWIs (#138)
* ENH: Run fieldmap estimation using *SDCFlows* 2.0 (#137)
* FIX/MAINT: Drop Python 3.6 + Revise Python environment (versions pinned) in Dockerfile (#146)
* MAINT: Update *SDCFlows* pinning to the latest 2.0.0 release (#152)
* DOC: Revise *dMRIPrep*'s road-map (#147)
* DOC: Add FSL ``topup`` reference in citation boilerplate (#148)
* DOC: change "functional" to "diffusion" (#143)

0.4.0

Release Notes

A minor release including T1w-DWI registration with FreeSurfer's bbregister.
This minor release also includes some documentation improvements and a fair
amount of maintenance tasks, the most salient of which is migrating our test
data to a DataLad + GitHub + OSF infrastructure that will allow more flexibly
update test datasets.

CHANGES

• ENH: Use bbregister upstreamed to NiWorkflows, with sloppy mode (#131)
• ENH: Port bbregister T1w-DWI registration from fMRIPrep (#125)
• DOC: Link NeuroHackademy session's video. (#120)
• DOC: Update readme and delete contributing guidelines in favor of nipreps website (#127)
• DOC: Add base SVG file for the "figure1" (aka the workflow) flowchart (#124)
• MAINT: Move test data to a full-datalad setting (#134)
• MAINT: Move packaging tests from TravisCI to GitHub Actions (#135)
• STY/MAINT: Preparing the first large overhaul of dMRIPrep (#130)
• MAINT: Adding J. Veraart and E. Dickie to the contributors' list (#126, #133)

0.3.0

Release Notes

A long overdue minor release initiating the 0.3.x series and including the milestones set for the 0.3.0 version in our roadmap.

CHANGES

• FIX: Revise vector tests broken when addressing other issues (#103)
• FIX: Minor refactor of DWI/brainmasks utilities and dtypes (#101)
• FIX: Test pin to reports_bug branch (#59)
• FIX: CircleCI on_fail command (#61)
• ENH: An initial implementation of SD estimation. (#97)
• ENH: Minor refactor reorganizing base workflows, in prep for #97 (#110)
• ENH: Use new DerivativesDataSink from NiWorkflows 1.2.0 (#108)
• ENH: Port the new anatomical fast-track from fMRIPrep (#109)
• ENH: Data-driven b0 identification tool (#107)
• ENH: Do not raise error in all instances of b-vecs/vals inconsistencies (#100)
• ENH: Update DiffusionGradientTable interface to support vector reorientation (#89)
• ENH: Update image utility output path behavior (#81)
• ENH: Adopt config module (#88)
• ENH: Added ds001771/sub-36 dataset and FS derivatives (#67)
• DOC: Add nipreps developers and year to LICENSE file (#69)
• DOC: Roadmap documentation (#58)
• DOC: Document the fact that we are using popylar/GA for usage tracking (#63)
• MAINT: Remove the leftovers of AFQ in .afq/ (#106)
• MAINT: Refactor the workflow to use Nipype iterables (#105)
• MAINT: Add ds001771 to the smoke-tests battery (#91)
• MAINT: Revisions after previous maintenance commit (#83) (#85)
• MAINT: Update dependencies (#83)

0.2.2

Release Notes

A release to show the deployment process on the Sprint.

CHANGES

• ENH: b0 reference and skullstrip workflow (#50)
• FIX: Version on docker target of Makefile (#54)
• FIX/ENH: Remove sentry tracking and add popylar tracking. (#51)
• MAINT: Some small changes to the Dockerfile. (#53)
• ENH: Set up customized report specification (#34)
• MAINT: Use a local docker registry instead of load/save (#46)

0.2.1

Release Notes

A bugfix release to test that versioned documentation is working.

CHANGES

• FIX: Remove count of DWI scans according to task_id (#10)
• ENH: Vector representation and checking utilities (#26)
• ENH: Start running smoke tests on CircleCI (#31)
• ENH: Add config for CircleCI (#13)
• DOC: Build versioned docs and deploy them to gh-pages (#45)
• MAINT: Revise execution options in CircleCi (#33)
• MAINT: A minimal infrastructure for unit-tests, with some initial test files (#32)
• MAINT: Add a branch step to the contribution guidelines. (#21)
• MAINT: Add maintenance script to update the changelog, update CHANGES (#22)
• MAINT: Add a base of CONTRIBUTING.md guidelines (#14)
• MAINT: Fix typos and add Makefiles (#11)
• MAINT: Add TravisCI for code linting with flake8 (#18)

0.2.0

Release Notes

A first attempt to roll out a release capable of running sMRIPrep for the anatomical processing. This release will also serve to exercise the continuous deployment set-up.

0.1.1a0

Testing Zenodo integration.

0.1.1

Tag to mark the start of a big refactor to adhere to fMRIPrep's principles. dMRIPrep will bring the contents of this branch back in as a plugin.