Merge pull request #28 from nlmixr2/extract_eq

Initial commit of extract_eq() to generate LaTeX equations from models

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: nlmixr2extra
 Title: Nonlinear Mixed Effects Models in Population PK/PD, Extra Support
     Functions
-Version: 2.0.8
+Version: 2.0.8.9000
 Authors@R: c(
     person("Matthew", "Fidler", email="matthew.fidler@gmail.com", role = c("aut", "cre"),
            comment = c(ORCID = "0000-0001-8538-6691")),
@@ -31,9 +31,11 @@ Imports:
     crayon,
     data.table,
     digest,
+    equatiomatic,
     ggplot2,
     ggtext,
     lotri,
+    methods,
     nlme,
     nlmixr2est (>= 2.1.1),
     Rcpp,
@@ -43,6 +45,7 @@ Imports:
     utils
 Suggests: 
     brms,
+    knitr,
     nlmixr2data,
     testthat (>= 3.0.0),
     withr,

NAMESPACE

@@ -1,6 +1,8 @@
 # Generated by roxygen2: do not edit by hand
 
 S3method(bootplot,nlmixr2FitCore)
+S3method(extract_eq,nlmixr2FitCore)
+S3method(extract_eq,rxUi)
 S3method(print,nlmixr2BoostrapSummary)
 export(adaptivelassoCoefficients)
 export(addCatCovariates)
@@ -12,6 +14,7 @@ export(bootstrapFit)
 export(buildcovInfo)
 export(buildupatedUI)
 export(covarSearchAuto)
+export(extract_eq)
 export(foldgen)
 export(forwardSearch)
 export(horseshoeSummardf)
@@ -29,6 +32,7 @@ export(regularmodel)
 import(lotri)
 import(utils)
 importFrom(Rcpp,evalCpp)
+importFrom(equatiomatic,extract_eq)
 importFrom(ggplot2,.data)
 importFrom(nlmixr2est,nlmixr)
 importFrom(nlmixr2est,nlmixr2)

NEWS.md

@@ -1,3 +1,8 @@
+# nlmixr2extra 2.0.9
+
+* New function `extract_eq()` will generate model equations for LaTeX reporting
+  automatically.
+
 # nlmixr2extra 2.0.8
 
 * Use `assignInMyNamespace()` instead of using the global assignment