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rm scm #72

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Oct 25, 2024
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2 changes: 1 addition & 1 deletion DESCRIPTION
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
Package: nlmixr2extra
Title: Nonlinear Mixed Effects Models in Population PK/PD, Extra Support
Functions
Version: 3.0.0
Version: 3.0.1
Authors@R: c(
person("Matthew", "Fidler", email="matthew.fidler@gmail.com", role = c("aut", "cre"),
comment = c(ORCID = "0000-0001-8538-6691")),
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3 changes: 0 additions & 3 deletions NAMESPACE
Original file line number Diff line number Diff line change
Expand Up @@ -20,15 +20,12 @@ export(adaptivelassoCoefficients)
export(addCatCovariates)
export(addorremoveCovariate)
export(adjustedlassoCoefficients)
export(backwardSearch)
export(bootplot)
export(bootstrapFit)
export(buildcovInfo)
export(buildupatedUI)
export(covarSearchAuto)
export(fixedControl)
export(foldgen)
export(forwardSearch)
export(horseshoeSummardf)
export(ini)
export(knit_print)
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4 changes: 4 additions & 0 deletions NEWS.md
Original file line number Diff line number Diff line change
@@ -1,3 +1,7 @@
# nlmixr2extra 3.0.1

* Remove non-functioning SCM for now (#71)

# nlmixr2extra 3.0.0

* New `profile()` method for likelihood profiling (Issue #1)
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6 changes: 3 additions & 3 deletions R/SCM.R
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@
#' of the covariate selection as well as "resFwd" for the forward
#' selection method and "resBck" for the backward selection method.
#'
#' @export
#' @noRd
#' @author Vipul Mann, Matthew Fidler, Vishal Sarsani
#'
#' @examples
Expand Down Expand Up @@ -146,7 +146,7 @@ covarSearchAuto <- function(fit,
#'
#' @return returns the updated 'fit' object at the end of the forward search and a table of information for all the covariates tested
#' @author Vipul Mann, Matthew Fidler, Vishal Sarsani
#' @export
#' @noRd
forwardSearch <- function(varsVec,covarsVec,catvarsVec=NULL,fit, pVal = 0.05, outputDir, restart = FALSE) {
## Update data and covarsvec if categorical variables are provided
if (!inherits(fit, "nlmixr2FitCore")) {
Expand Down Expand Up @@ -315,7 +315,7 @@ forwardSearch <- function(varsVec,covarsVec,catvarsVec=NULL,fit, pVal = 0.05, ou
#' @param restart a boolean that controls if the search should be restarted; default is FALSE
#'
#' @return returns the updated 'fit' object at the end of the backward search and a table of information for all the covariates tested
#' @export
#' @noRd
#'
#' @author Vipul Mann, Matthew Fidler, Vishal Sarsani
backwardSearch <- function(varsVec,covarsVec,catvarsVec=NULL, fitorig, fitupdated, pVal = 0.01, reFitCovars = FALSE, outputDir, restart = FALSE) {
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46 changes: 0 additions & 46 deletions man/backwardSearch.Rd

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98 changes: 0 additions & 98 deletions man/covarSearchAuto.Rd

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40 changes: 0 additions & 40 deletions man/forwardSearch.Rd

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