Some more fixes for the tests and pkgdown

nlmixr2 · May 20, 2022 · f76c702 · f76c702
1 parent 6584c52
commit f76c702
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Showing 3 changed files with 4 additions and 7 deletions.
diff --git a/_pkgdown.yml b/_pkgdown.yml
@@ -8,10 +8,7 @@ reference:
   contents:
   - '`traceplot`'
   - '`vpcPlot`'
-- title: ggplot2 functions
-  contents:
-  - '`stat_amt`'
-  - '`stat_cens`'
 - title: Internal functions
   contents:
   - '`plot.nlmixr2FitData`'
+  - '`plot.nlmixr2AugPred`'
diff --git a/tests/testthat/test-plots-cens.R b/tests/testthat/test-plots-cens.R
@@ -50,7 +50,7 @@ test_that("plot censoring", {
                                      control=list(print=0),
                                      table=nlmixr2est::tableControl(cwres=TRUE, npde=TRUE))
 
-  expect_error(nlmixr2est::augPred(fit), NA)
+  apo <- nlmixr2est::augPred(fit)
   expect_error(plot(apo), NA)
   expect_error(vpcPlot(fit, stratify="DOSE"), NA)
   expect_error(vpcPlot(fit, pred_corr=TRUE, stratify="DOSE", log_y=TRUE), NA)

diff --git a/tests/testthat/test-plots-multiple-endpoints.R b/tests/testthat/test-plots-multiple-endpoints.R
@@ -61,8 +61,8 @@ test_that("multiple endpoint plots", {
 
   apo <- nlmixr2est::augPred(fit)
   expect_error(plot(apo), NA)
-  expect_error(vpcPlot(fit))
-  expect_error(vpcPlot(fit, pred_corr=TRUE))
+  expect_error(vpcPlot(fit), NA)
+  expect_error(vpcPlot(fit, pred_corr=TRUE), NA)
 
   expect_error(plot(fit), NA)