Oligo classification fixes #292

	name: CI

	# Controls when the action will run.
	on:
	# Triggers the workflow on push or pull request events but only for the master branch
	push:
	branches: [ master ]
	pull_request:

	# Allows you to run this workflow manually from the Actions tab
	workflow_dispatch:

	# A workflow run is made up of one or more jobs that can run sequentially or in parallel
	jobs:
	# This workflow contains a single job called "ontology_qc"
	build:
	# The type of runner that the job will run on
	runs-on: ubuntu-latest
	container: obolibrary/odkfull:v1.4

	# Steps represent a sequence of tasks that will be executed as part of the job
	steps:
	# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
	- uses: actions/checkout@v2
	- name: install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install -r requirements.txt
	- name: validate schemas
	run: \|
	python ./src/config/config_schema_validator.py
	- name: Run Test
	run: PYTHONPATH=./src/scripts:$PYTHONPATH python -m unittest discover -s src -p '*_test.py'
	- name: verify and build
	env:
	DEFAULT_BRANCH: master
	run: cd src/ontology && make ROBOT_ENV='ROBOT_JAVA_ARGS=-Xmx6G' test IMP=false PAT=false

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