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Avoid pulling down old jaxlib in tests (#504)
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* Avoid pulling down old jaxlib

* Rework

* Fixes

* Avoid pymbar 3.0

* Explicitly install jax/jaxlib >=0.3
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mattwthompson authored Mar 13, 2023
1 parent 27ef2a9 commit e7f07fa
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12 changes: 6 additions & 6 deletions .github/workflows/ci.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -32,7 +32,7 @@ jobs:
- 3.8
- 3.9
pymbar-version:
- 3
- 3.1
- 4
openmm-version:
- 7
Expand All @@ -49,13 +49,13 @@ jobs:
uses: mamba-org/provision-with-micromamba@main
with:
environment-file: devtools/conda-envs/test_env.yaml
channel-priority: flexible
extra-specs: |
python=${{ matrix.python-version }}
- name: Update openmm, pymbar versions
shell: bash -l {0}
run: |
micromamba install "openmm =${{ matrix.openmm-version }}" "pymbar =${{ matrix.pymbar-version }}" -c conda-forge -yq
pymbar=${{ matrix.pymbar-version }}
openmm=${{ matrix.openmm-version }}
jax>=0.3
jaxlib>=0.3
- name: Install OpenEye
if: matrix.openeye
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4 changes: 2 additions & 2 deletions devtools/conda-envs/test_env.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -17,8 +17,8 @@ dependencies:

# Standard dependencies
- openff-toolkit >=0.11.0
- openmm =8
- pymbar =3|4
- openmm
- pymbar
- dask >=2.7.0
- distributed >=2.7.0
- dask-jobqueue >=0.8.0
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