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New Release 0.14.2 #1323
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New Release 0.14.2 #1323
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updates: - [github.com/psf/black: 23.3.0 → 23.7.0](psf/black@23.3.0...23.7.0) - [github.com/pycqa/flake8: 6.0.0 → 6.1.0](PyCQA/flake8@6.0.0...6.1.0)
[pre-commit.ci] pre-commit autoupdate
* Add multiple build platforms * Automatically update Dockerhub description * Launch Python instead of Bash by default * Change `omlp` directory name to less cryptic `openml` * Change directory to `openml` for running purpose of running script For mounted scripts, instructions say to mount them to `/openml`, so we have to `cd` before invoking `python`. * Update readme to reflect updates (python by default, rename dirs) * Add branch/code for doc and test examples as they are required * Ship docker images with readme * Only update readme on release, also try build docker on PR * Update the toc descriptions
* carefully replaced minio with parquet * fix: corrected some mistakes * fix: restored the instances of minio * fix: updated the documentation * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Add #1280 I used a `next` header instead of a specific version since we don't know if it will be 0.15.0 or 0.14.2. We can change it before the next release. --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Pieter Gijsbers <p.gijsbers@tue.nl> Co-authored-by: Lennart Purucker <lennart.purucker@uni-siegen.de>
* Extract mocked_perform_api_call because its independent of object * Remove _multiprocess_can_split_ as it is a nose directive and we use pytest * Convert test list all * Add markers and refactor test_list_all_for_tasks for pytest * Add cache marker * Converted remainder of tests to pytest
Add documentation and type hints for the remaining attributes of classes and functions. --------- Co-authored-by: Lennart Purucker <contact@lennart-purucker.com> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
updates: - [github.com/psf/black: 23.7.0 → 23.11.0](psf/black@23.7.0...23.11.0) - [github.com/pre-commit/mirrors-mypy: v1.4.1 → v1.7.0](pre-commit/mirrors-mypy@v1.4.1...v1.7.0) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
updates: - [github.com/psf/black: 23.11.0 → 23.12.1](psf/black@23.11.0...23.12.1) - [github.com/pre-commit/mirrors-mypy: v1.7.0 → v1.8.0](pre-commit/mirrors-mypy@v1.7.0...v1.8.0) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v3...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [docker/login-action](https://github.com/docker/login-action) from 2 to 3. - [Release notes](https://github.com/docker/login-action/releases) - [Commits](docker/login-action@v2...v3) --- updated-dependencies: - dependency-name: docker/login-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [docker/metadata-action](https://github.com/docker/metadata-action) from 4 to 5. - [Release notes](https://github.com/docker/metadata-action/releases) - [Upgrade guide](https://github.com/docker/metadata-action/blob/master/UPGRADE.md) - [Commits](docker/metadata-action@v4...v5) --- updated-dependencies: - dependency-name: docker/metadata-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [docker/setup-qemu-action](https://github.com/docker/setup-qemu-action) from 2 to 3. - [Release notes](https://github.com/docker/setup-qemu-action/releases) - [Commits](docker/setup-qemu-action@v2...v3) --- updated-dependencies: - dependency-name: docker/setup-qemu-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4 to 5. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](docker/build-push-action@v4...v5) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
* Add more type annotations * add to progress rst --------- Co-authored-by: Lennart Purucker <git@lennart-purucker.com>
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2 to 3. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](docker/setup-buildx-action@v2...v3) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [actions/setup-python](https://github.com/actions/setup-python) from 4 to 5. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](actions/setup-python@v4...v5) --- updated-dependencies: - dependency-name: actions/setup-python dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
* rework tagging test adjusted for new server specification * update progress.rst
* ci: Migrate everything to pyproject.toml * style: Apply ruff fixes * style: Apply (more) ruff fixes * style(ruff): Add some file specific ignores * ci: Fix build with setuptools * ci(ruff): Allow prints in cli.py * fix: Circular import * test: Use raises(..., match=) * fix(cli): re-add missing print statements * fix: Fix some over ruff-ized code * add make check to documentation * ci: Change to `build` for sdist * ci: Add ruff to `"test"` deps --------- Co-authored-by: Lennart Purucker <git@lennart-purucker.com>
* fix: Chipping away at ruff lints * fix: return lockfile path * Update openml/config.py * Update openml/runs/functions.py * Update openml/tasks/functions.py * Update openml/tasks/split.py * Update openml/utils.py * Update openml/utils.py * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Update openml/config.py * Update openml/testing.py * Update openml/utils.py * Update openml/config.py * Update openml/utils.py * Update openml/utils.py * add concurrency to workflow calls * adjust docstring * adjust docstring * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --------- Co-authored-by: Lennart Purucker <contact@lennart-purucker.com> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Lennart Purucker <git@lennart-purucker.com>
* update tagging constraints * openml python tests * small fix
updates: - https://github.com/charliermarsh/ruff-pre-commit → https://github.com/astral-sh/ruff-pre-commit - [github.com/astral-sh/ruff-pre-commit: v0.1.5 → v0.1.11](astral-sh/ruff-pre-commit@v0.1.5...v0.1.11) - [github.com/python-jsonschema/check-jsonschema: 0.27.1 → 0.27.3](python-jsonschema/check-jsonschema@0.27.1...0.27.3) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
* style: Fix linting split.py * typing: Fix mypy errors split.py * typing: data_feature * typing: trace * more linting fixes * typing: finish up trace * typing: config.py * typing: More fixes on config.py * typing: setup.py * finalize runs linting * typing: evaluation.py * typing: setup * ruff fixes across different files and mypy fixes for run files * typing: _api_calls * adjust setup files' linting and minor ruff changes * typing: utils * late night push * typing: utils.py * typing: tip tap tippity * typing: mypy 78, ruff ~200 * refactor output format name and minor linting stuff * other: midway merge * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * typing: I'm runnign out of good messages * typing: datasets * leinting for flows and some ruff changes * no more mypy errors * ruff runs and setups * typing: Finish off mypy and ruff errors Co-authored-by: Bilgecelik <38037323+Bilgecelik@users.noreply.github.com> * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * style: File wide ignores of PLR0913 This is because the automated pre-commit.ci bot which made automatic commits and pushes would think the `noqa` on the individualy overloaded functions was not needed. After removing the `noqa`, the linter then raised the issue --------- Co-authored-by: eddiebergman <eddiebergmanhs@gmail.com> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Bilgecelik <38037323+Bilgecelik@users.noreply.github.com>
* mark production tests * make production test run * fix test bug -1/N * add retry raise again after refactor * fix str dict representation * test: Fix non-writable home mocks * testing: not not a change * testing: trigger CI * typing: Update typing * ci: Update testing matrix * testing: Fixup run flow error check * ci: Manual dispatch, disable double testing * ci: Prevent further ci duplication * ci: Add concurrency checks to all * ci: Remove the max-parallel on test ci There are a lot less now and they cancel previous puhes in the same pr now so it shouldn't be a problem anymore * testing: Fix windows path generation * add pytest for server state * add assert cache state * some formatting * fix with cache fixture * finally remove th finally * doc: Fix link * update test matrix * doc: Update to just point to contributing * add linkcheck ignore for test server --------- Co-authored-by: eddiebergman <eddiebergmanhs@gmail.com>
Co-authored-by: Jan van Rijn <janvanrijn@gmail.com>
* mark production tests * make production test run * fix test bug -1/N * add retry raise again after refactor * fix str dict representation * test: Fix non-writable home mocks * testing: not not a change * testing: trigger CI * typing: Update typing * ci: Update testing matrix * testing: Fixup run flow error check * ci: Manual dispatch, disable double testing * ci: Prevent further ci duplication * ci: Add concurrency checks to all * ci: Remove the max-parallel on test ci There are a lot less now and they cancel previous puhes in the same pr now so it shouldn't be a problem anymore * testing: Fix windows path generation * add pytest for server state * add assert cache state * some formatting * fix with cache fixture * finally remove th finally * doc: Fix link * update test matrix * doc: Update to just point to contributing * add linkcheck ignore for test server * add special case for class labels that are dtype string * fix bug and add test * formatting --------- Co-authored-by: eddiebergman <eddiebergmanhs@gmail.com>
* [pre-commit.ci] pre-commit autoupdate updates: - [github.com/astral-sh/ruff-pre-commit: v0.1.11 → v0.1.13](astral-sh/ruff-pre-commit@v0.1.11...v0.1.13) * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
* Update fetching a bucket from MinIO Previously, each dataset had their own bucket: https://openml1.win.tue.nl/datasets61/dataset_61.pq But we were advised to reduce the amount of buckets and favor hosting many objects in hierarchical structure, so we now have instead some prefixes to divide up the dataset objects into separate subdirectories: https://openml1.win.tue.nl/datasets/0000/0061/dataset_61.pq This commit has bypassed pre-commit. Tests should be updated too. * ci: Trigger ci * ci: Add some files to .gitignore --------- Co-authored-by: PGijsbers <p.gijsbers@tue.nl>
* Update progress.rst for minor release * update version number * fix typo
Co-authored-by: Pieter Gijsbers <p.gijsbers@tue.nl>
* [pre-commit.ci] pre-commit autoupdate updates: - [github.com/psf/black: 23.3.0 → 23.7.0](psf/black@23.3.0...23.7.0) - [github.com/pycqa/flake8: 6.0.0 → 6.1.0](PyCQA/flake8@6.0.0...6.1.0) * Raise correct TypeError and improve type check * Type check with isinstance instead of type() == * Docker enhancement #1277 (#1278) * Add multiple build platforms * Automatically update Dockerhub description * Launch Python instead of Bash by default * Change `omlp` directory name to less cryptic `openml` * Change directory to `openml` for running purpose of running script For mounted scripts, instructions say to mount them to `/openml`, so we have to `cd` before invoking `python`. * Update readme to reflect updates (python by default, rename dirs) * Add branch/code for doc and test examples as they are required * Ship docker images with readme * Only update readme on release, also try build docker on PR * Update the toc descriptions * fix: carefully replaced minio_url with parquet_url (#1280) * carefully replaced minio with parquet * fix: corrected some mistakes * fix: restored the instances of minio * fix: updated the documentation * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Add #1280 I used a `next` header instead of a specific version since we don't know if it will be 0.15.0 or 0.14.2. We can change it before the next release. --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Pieter Gijsbers <p.gijsbers@tue.nl> Co-authored-by: Lennart Purucker <lennart.purucker@uni-siegen.de> * Pytest/utils (#1269) * Extract mocked_perform_api_call because its independent of object * Remove _multiprocess_can_split_ as it is a nose directive and we use pytest * Convert test list all * Add markers and refactor test_list_all_for_tasks for pytest * Add cache marker * Converted remainder of tests to pytest * Documented remaining Attributes of classes and functions (#1283) Add documentation and type hints for the remaining attributes of classes and functions. --------- Co-authored-by: Lennart Purucker <contact@lennart-purucker.com> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> * [pre-commit.ci] pre-commit autoupdate (#1281) updates: - [github.com/psf/black: 23.7.0 → 23.11.0](psf/black@23.7.0...23.11.0) - [github.com/pre-commit/mirrors-mypy: v1.4.1 → v1.7.0](pre-commit/mirrors-mypy@v1.4.1...v1.7.0) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> * [pre-commit.ci] pre-commit autoupdate (#1291) updates: - [github.com/psf/black: 23.11.0 → 23.12.1](psf/black@23.11.0...23.12.1) - [github.com/pre-commit/mirrors-mypy: v1.7.0 → v1.8.0](pre-commit/mirrors-mypy@v1.7.0...v1.8.0) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> * Bump actions/checkout from 3 to 4 (#1284) Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v3...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/login-action from 2 to 3 (#1285) Bumps [docker/login-action](https://github.com/docker/login-action) from 2 to 3. - [Release notes](https://github.com/docker/login-action/releases) - [Commits](docker/login-action@v2...v3) --- updated-dependencies: - dependency-name: docker/login-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/metadata-action from 4 to 5 (#1286) Bumps [docker/metadata-action](https://github.com/docker/metadata-action) from 4 to 5. - [Release notes](https://github.com/docker/metadata-action/releases) - [Upgrade guide](https://github.com/docker/metadata-action/blob/master/UPGRADE.md) - [Commits](docker/metadata-action@v4...v5) --- updated-dependencies: - dependency-name: docker/metadata-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/setup-qemu-action from 2 to 3 (#1287) Bumps [docker/setup-qemu-action](https://github.com/docker/setup-qemu-action) from 2 to 3. - [Release notes](https://github.com/docker/setup-qemu-action/releases) - [Commits](docker/setup-qemu-action@v2...v3) --- updated-dependencies: - dependency-name: docker/setup-qemu-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/build-push-action from 4 to 5 (#1288) Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4 to 5. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](docker/build-push-action@v4...v5) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add more type annotations (#1261) * Add more type annotations * add to progress rst --------- Co-authored-by: Lennart Purucker <git@lennart-purucker.com> * Bump docker/setup-buildx-action from 2 to 3 (#1292) Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2 to 3. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](docker/setup-buildx-action@v2...v3) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump actions/setup-python from 4 to 5 (#1293) Bumps [actions/setup-python](https://github.com/actions/setup-python) from 4 to 5. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](actions/setup-python@v4...v5) --- updated-dependencies: - dependency-name: actions/setup-python dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Rework Tagging Tests for New Server Specification (#1294) * rework tagging test adjusted for new server specification * update progress.rst * ci: Update tooling (#1298) * ci: Migrate everything to pyproject.toml * style: Apply ruff fixes * style: Apply (more) ruff fixes * style(ruff): Add some file specific ignores * ci: Fix build with setuptools * ci(ruff): Allow prints in cli.py * fix: Circular import * test: Use raises(..., match=) * fix(cli): re-add missing print statements * fix: Fix some over ruff-ized code * add make check to documentation * ci: Change to `build` for sdist * ci: Add ruff to `"test"` deps --------- Co-authored-by: Lennart Purucker <git@lennart-purucker.com> * ci: Disable 3.6 tests (#1302) * fix: Chipping away at ruff lints (#1303) * fix: Chipping away at ruff lints * fix: return lockfile path * Update openml/config.py * Update openml/runs/functions.py * Update openml/tasks/functions.py * Update openml/tasks/split.py * Update openml/utils.py * Update openml/utils.py * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Update openml/config.py * Update openml/testing.py * Update openml/utils.py * Update openml/config.py * Update openml/utils.py * Update openml/utils.py * add concurrency to workflow calls * adjust docstring * adjust docstring * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --------- Co-authored-by: Lennart Purucker <contact@lennart-purucker.com> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Lennart Purucker <git@lennart-purucker.com> * Tagging constraints (#1305) * update tagging constraints * openml python tests * small fix * [pre-commit.ci] pre-commit autoupdate (#1306) updates: - https://github.com/charliermarsh/ruff-pre-commit → https://github.com/astral-sh/ruff-pre-commit - [github.com/astral-sh/ruff-pre-commit: v0.1.5 → v0.1.11](astral-sh/ruff-pre-commit@v0.1.5...v0.1.11) - [github.com/python-jsonschema/check-jsonschema: 0.27.1 → 0.27.3](python-jsonschema/check-jsonschema@0.27.1...0.27.3) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> * Linting Everything - Fix All mypy and ruff Errors (#1307) * style: Fix linting split.py * typing: Fix mypy errors split.py * typing: data_feature * typing: trace * more linting fixes * typing: finish up trace * typing: config.py * typing: More fixes on config.py * typing: setup.py * finalize runs linting * typing: evaluation.py * typing: setup * ruff fixes across different files and mypy fixes for run files * typing: _api_calls * adjust setup files' linting and minor ruff changes * typing: utils * late night push * typing: utils.py * typing: tip tap tippity * typing: mypy 78, ruff ~200 * refactor output format name and minor linting stuff * other: midway merge * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * typing: I'm runnign out of good messages * typing: datasets * leinting for flows and some ruff changes * no more mypy errors * ruff runs and setups * typing: Finish off mypy and ruff errors Co-authored-by: Bilgecelik <38037323+Bilgecelik@users.noreply.github.com> * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * style: File wide ignores of PLR0913 This is because the automated pre-commit.ci bot which made automatic commits and pushes would think the `noqa` on the individualy overloaded functions was not needed. After removing the `noqa`, the linter then raised the issue --------- Co-authored-by: eddiebergman <eddiebergmanhs@gmail.com> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Bilgecelik <38037323+Bilgecelik@users.noreply.github.com> * ci: Remove Python 3.6/7 (#1308) * ci: remove 3.7 patch (#1309) * Make Test Work Again After Ruff and Linter Changes (#1310) * mark production tests * make production test run * fix test bug -1/N * add retry raise again after refactor * fix str dict representation * test: Fix non-writable home mocks * testing: not not a change * testing: trigger CI * typing: Update typing * ci: Update testing matrix * testing: Fixup run flow error check * ci: Manual dispatch, disable double testing * ci: Prevent further ci duplication * ci: Add concurrency checks to all * ci: Remove the max-parallel on test ci There are a lot less now and they cancel previous puhes in the same pr now so it shouldn't be a problem anymore * testing: Fix windows path generation * add pytest for server state * add assert cache state * some formatting * fix with cache fixture * finally remove th finally * doc: Fix link * update test matrix * doc: Update to just point to contributing * add linkcheck ignore for test server --------- Co-authored-by: eddiebergman <eddiebergmanhs@gmail.com> * Add Feature Descriptions Rebase Clean (#1316) Co-authored-by: Jan van Rijn <janvanrijn@gmail.com> * Make Class Label Retrieval More Lenient (#1315) * mark production tests * make production test run * fix test bug -1/N * add retry raise again after refactor * fix str dict representation * test: Fix non-writable home mocks * testing: not not a change * testing: trigger CI * typing: Update typing * ci: Update testing matrix * testing: Fixup run flow error check * ci: Manual dispatch, disable double testing * ci: Prevent further ci duplication * ci: Add concurrency checks to all * ci: Remove the max-parallel on test ci There are a lot less now and they cancel previous puhes in the same pr now so it shouldn't be a problem anymore * testing: Fix windows path generation * add pytest for server state * add assert cache state * some formatting * fix with cache fixture * finally remove th finally * doc: Fix link * update test matrix * doc: Update to just point to contributing * add linkcheck ignore for test server * add special case for class labels that are dtype string * fix bug and add test * formatting --------- Co-authored-by: eddiebergman <eddiebergmanhs@gmail.com> * [pre-commit.ci] pre-commit autoupdate (#1318) * [pre-commit.ci] pre-commit autoupdate updates: - [github.com/astral-sh/ruff-pre-commit: v0.1.11 → v0.1.13](astral-sh/ruff-pre-commit@v0.1.11...v0.1.13) * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> * Fix: update fetching a bucket from MinIO (#1314) * Update fetching a bucket from MinIO Previously, each dataset had their own bucket: https://openml1.win.tue.nl/datasets61/dataset_61.pq But we were advised to reduce the amount of buckets and favor hosting many objects in hierarchical structure, so we now have instead some prefixes to divide up the dataset objects into separate subdirectories: https://openml1.win.tue.nl/datasets/0000/0061/dataset_61.pq This commit has bypassed pre-commit. Tests should be updated too. * ci: Trigger ci * ci: Add some files to .gitignore --------- Co-authored-by: PGijsbers <p.gijsbers@tue.nl> * Update progress.rst for minor release (#1319) * Update progress.rst for minor release * update version number * fix typo * Prepare Develop for Merge with Main (#1321) Co-authored-by: Pieter Gijsbers <p.gijsbers@tue.nl> --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Pieter Gijsbers <p.gijsbers@tue.nl> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Devansh Varshney (देवांश वार्ष्णेय) <varshney.devansh614@gmail.com> Co-authored-by: Lennart Purucker <lennart.purucker@uni-siegen.de> Co-authored-by: Vishal Parmar <vishalm524112@gmail.com> Co-authored-by: Lennart Purucker <contact@lennart-purucker.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Matthias Feurer <feurerm@informatik.uni-freiburg.de> Co-authored-by: Lennart Purucker <git@lennart-purucker.com> Co-authored-by: janvanrijn <janvanrijn@gmail.com> Co-authored-by: Lennart Purucker <purucker@cs.uni-freiburg.de> Co-authored-by: Bilgecelik <38037323+Bilgecelik@users.noreply.github.com>
There are some problems with the history between |
Codecov ReportAttention: Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## main #1323 +/- ##
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- Coverage 85.19% 83.88% -1.32%
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Files 38 38
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+ Hits 4351 4413 +62
- Misses 756 848 +92 ☔ View full report in Codecov by Sentry. |
updates: - [github.com/astral-sh/ruff-pre-commit: v0.1.13 → v0.1.14](astral-sh/ruff-pre-commit@v0.1.13...v0.1.14) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
* read file in read mode * cast parameters to expected types * Following PGijsbers proposal to ensure that avoid_duplicate_runs is a boolean after reading it from config_file * Add a test, move parsing of avoid_duplicate_runs --------- Co-authored-by: PGijsbers <p.gijsbers@tue.nl>
* Update 'sparse' parameter for OHE for sklearn >= 1.4 * Add compatability or skips for sklearn >= 1.4 * Change 'auto' to 'sqrt' for sklearn>1.3 as 'auto' is deprecated * Skip flaky test It is unclear how a condition where the test is supposed to pass is created. Even after running the test suite 2-3 times, it does not yet seem to pass. * Fix typo * Ignore description comparison for newer scikit-learn There are some minor changes to the docstrings. I do not know that it is useful to keep testing it this way, so for now I will disable the test on newer versions. * Adjust for scikit-learn 1.3 The loss has been renamed. The performance of the model also seems to have changed slightly for the same seed. So I decided to compare with the lower fidelity that was already used on Windows systems. * Remove timeout and reruns to better investigate CI failures * Fix typo in parametername * Add jobs for more recent scikit-learns * Expand the matrix with all scikit-learn 1.x versions * Fix for numpy2.0 compatibility (#1341) Numpy2.0 cleaned up their namespace. * Rewrite matrix and update numpy compatibility * Move comment in-line * Stringify name of new step to see if that prevented the action * Fix unspecified os for included jobs * Fix typo in version pinning for numpy * Fix version specification for sklearn skips * Output final list of installed packages for debugging purposes * Cap scipy version for older versions of scikit-learn There is a breaking change to the way 'mode' works, that breaks scikit-learn internals. * Update parameter base_estimator to estimator for sklearn>=1.4 * Account for changes to sklearn interface in 1.4 and 1.5 * Non-strict reinstantiation requires different scikit-learn version * Parameters were already changed in 1.4 * Fix race condition (I think) It seems to me that run.evaluations is set only when the run is fetched. Whether it has evaluations depends on server state. So if the server has resolved the traces between the initial fetch and the trace-check, you could be checking len(run.evaluations) where evaluations is None. * Use latest patch version of each minor release * Convert numpy types back to builtin types Scikit-learn or numpy changed the typing of the parameters (seen in a masked array, not sure if also outside of that). Convert these values back to Python builtins. * Specify versions with * instead to allow for specific patches * Flow_exists does not return None but False is the flow does not exist * Update new version definitions also installation step * Fix bug introduced in refactoring for np.generic support We don't want to serialize as the value np.nan, we want to include the nan directly. It is an indication that the parameter was left unset. * Add back the single-test timeout of 600s * [skip ci] Add note to changelog * Check that evaluations are present with None-check instead The default behavior if no evaluation is present is for it to be None. So it makes sense to check for that instead. As far as I can tell, run.evaluations should always contain some items if it is not None. But I added an assert just in case. * Remove timeouts again I suspect they "crash" workers. This of course introduces the risk of hanging processes... But I cannot reproduce the issue locally.
* Add HTTP headers to all requests This allows us to better understand the traffic we see to our API. It is not identifiable to a person. * Update unit test to pass even with user-agent in header
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