Repositories list

• gReLU

  Public
  gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

  Python

  •

  MIT License

  •23•226•22•5•Updated Nov 20, 2024Nov 20, 2024

• scimilarity

  Public
  A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.

  Python

  •

  Other

  •1•93•10•0•Updated Nov 20, 2024Nov 20, 2024

• polygraph

  Public
  Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of regulatory elements.

  Jupyter Notebook

  •

  MIT License

  •0•27•1•0•Updated Nov 18, 2024Nov 18, 2024

• SpatialQPFs

  Public
  HTML

  •0•1•0•0•Updated Nov 17, 2024Nov 17, 2024

• spex

  Public
  Jupyter Notebook

  •

  Other

  •0•0•1•0•Updated Nov 16, 2024Nov 16, 2024

• spex_spatial_transcriptomics

  Public
  Jupyter Notebook

  •

  Other

  •0•0•0•0•Updated Nov 16, 2024Nov 16, 2024

• jmpost

  Public
  R

  •4•17•55•1•Updated Nov 15, 2024Nov 15, 2024

• checked

  Public
  batch R CMD check management

  rchecksrevdeps

  R

  •

  Other

  •1•7•10•0•Updated Nov 13, 2024Nov 13, 2024

• fcr

  Public
  Jupyter Notebook

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 12, 2024Nov 12, 2024

• beignet

  Public
  A standard library for biological research.

  Python

  •

  MIT License

  •5•17•13•15•Updated Nov 8, 2024Nov 8, 2024

• PepMapViz

  Public
  R

  •

  Other

  •0•0•0•0•Updated Nov 7, 2024Nov 7, 2024

• psborrow2

  Public
  psborrow2: Bayesian Dynamic Borrowing Simulation Study and Analysis

  simulation-studybayesian-dynamic-borrowingpsborrow2+ 1r

  R

  •

  Other

  •2•17•6•2•Updated Nov 6, 2024Nov 6, 2024

• spex_clustering

  Public
  Python

  •

  Other

  •0•0•0•0•Updated Nov 6, 2024Nov 6, 2024

• survivalCCW

  Public
  R

  •

  Other

  •0•0•4•0•Updated Nov 5, 2024Nov 5, 2024

• spex_ms_job_manager

  Public
  Python

  •

  Other

  •0•0•0•0•Updated Nov 5, 2024Nov 5, 2024

• molcap-arena

  Public
  Associated Repository for "MolCap-Arena: A Comprehensive Captioning Benchmark on Language-Enhanced Molecular Property Prediction"

  Python

  •

  Other

  •0•2•0•0•Updated Nov 4, 2024Nov 4, 2024

• 2024_cruz_etal

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Oct 29, 2024Oct 29, 2024

• spex_bundle

  Public
  Jupyter Notebook

  •

  Other

  •0•1•0•0•Updated Oct 27, 2024Oct 27, 2024

• spex_segmentation

  Public
  Jupyter Notebook

  •

  Other

  •0•0•0•0•Updated Oct 27, 2024Oct 27, 2024

• spex_common

  Public
  Python

  •

  Other

  •0•0•0•0•Updated Oct 27, 2024Oct 27, 2024

• spex_ms_pipeline_manager

  Public
  Python

  •

  Other

  •0•0•0•0•Updated Oct 27, 2024Oct 27, 2024

• spex_ms_omero_sessions

  Public
  Python

  •

  Other

  •0•0•0•0•Updated Oct 27, 2024Oct 27, 2024

• spex_ms_omero_image_downloader

  Public
  Python

  •

  Other

  •0•0•0•0•Updated Oct 27, 2024Oct 27, 2024

• spex_frontend

  Public
  JavaScript

  •

  Other

  •0•0•0•0•Updated Oct 27, 2024Oct 27, 2024

• spex_backend

  Public
  Python

  •

  Other

  •0•0•0•0•Updated Oct 27, 2024Oct 27, 2024

• pascient

  Public
  Jupyter Notebook

  •

  Other

  •2•2•0•0•Updated Oct 25, 2024Oct 25, 2024

• rd2markdown

  Public
  R

  •

  Other

  •0•7•5•0•Updated Oct 23, 2024Oct 23, 2024

• phase1b

  Public
  R

  •

  Other

  •1•3•18•2•Updated Oct 19, 2024Oct 19, 2024

• set-dino

  Public
  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Oct 16, 2024Oct 16, 2024

• pep2vec

  Public
  Python

  •

  Other

  •0•1•0•0•Updated Oct 14, 2024Oct 14, 2024