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    13 repositories

    • CAGNET

      Public
      Python
      •
      Other
      •17•42•1•0•Updated Nov 9, 2024Nov 9, 2024

    • PASTIS

      Public
      Distributed Protein Sequence Aligner
      C++
      •
      Other
      •0•6•6•0•Updated Oct 3, 2024Oct 3, 2024

    • CombBLAS

      Public
      The Combinatorial BLAS (CombBLAS) is an extensible distributed-memory parallel graph library offering a small but powerful set of linear algebra primitives specifically targeting graph analytics.
      C++
      •
      Other
      •22•66•12•1•Updated Jul 29, 2024Jul 29, 2024

    • ELBA

      Public
      Parallel String Graph Construction, Transitive Reduction, and Contig Generation for De Novo Genome Assembly
      genomehpcoverlappinggenome-assemblyhpc-applicationskmer-countinglongreadspgemmlongread-alignercombblas
      C++
      •
      Other
      •9•15•0•0•Updated Jun 11, 2024Jun 11, 2024

    • terrace

      Public
      Terrace: A Hierarchical Graph Container for Skewed Dynamic Graphs
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •7•21•2•0•Updated Jun 18, 2023Jun 18, 2023

    • CSB

      Public
      C++
      •1•2•0•1•Updated Aug 13, 2022Aug 13, 2022

    • HUNTRESS

      Public
      Approximate reconstruction algorithm for matrices having false positives and false negatives
      Python
      •
      Other
      •1•3•0•0•Updated Jul 12, 2022Jul 12, 2022

    • distributed_sddmm

      Public
      Distributed SDDMM Kernel
      C++
      •1•10•0•0•Updated Jul 8, 2022Jul 8, 2022

    • MaskedSpGEMM

      Public
      C++
      •
      Apache License 2.0
      •3•8•1•0•Updated Jul 4, 2022Jul 4, 2022

    • BELLA

      Public
      BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper
      matrix-multiplicationlong-readspgemmgenome-alignmentpacbio-alignerlongread-alignerread-alignersoverlapper
      C++
      •
      Other
      •8•48•3•0•Updated May 16, 2022May 16, 2022

    • gpu-counting-filter

      Public
      A General-Purpose Counting Filter: Counting Quotient Filter
      Cuda
      •
      BSD 3-Clause "New" or "Revised" License
      •34•2•0•0•Updated Apr 9, 2022Apr 9, 2022

    • GraphLearning

      Public
      2•0•0•0•Updated Mar 31, 2022Mar 31, 2022

    • DEDUKT

      Public
      C++
      •2•5•1•0•Updated Feb 26, 2021Feb 26, 2021