Repositories list

• barelli_et_al_scirep_2021

  Public
  Scripts and data for Barelli et al. "Interactions between parasitic helminths and gut microbiota in wild tropical primates from intact and fragmented habitats"

  0•0•0•0•Updated Sep 8, 2021Sep 8, 2021

• AIforEarth2020

  Public
  Shell

  •0•0•0•0•Updated Jun 19, 2020Jun 19, 2020

• docker-rdpclassifier

  Public
  Dockerfile

  •0•0•0•0•Updated Apr 15, 2020Apr 15, 2020

• barelli_et_al_msystems_2020

  Public
  Machine Learning scripts and data for Barelli et al. "The gut microbiota communities of wild arboreal and ground-feeding tropical primates are affected differently by habitat disturbance"

  Python

  •0•1•0•0•Updated Mar 23, 2020Mar 23, 2020

• micca

  Public
  micca - MICrobial Community Analysis

  bioinformaticsclusteringmetagenomics+ 1amplicon

  Python

  •

  GNU General Public License v3.0

  •9•20•6•0•Updated Feb 12, 2020Feb 12, 2020

• strainest

  Public
  StrainEst - abundance estimation of strains

  C++

  •

  GNU General Public License v3.0

  •6•21•3•0•Updated Jan 17, 2020Jan 17, 2020

• rstudio-micca

  Public
  RStudio - micca

  Dockerfile

  •0•1•0•0•Updated Sep 3, 2019Sep 3, 2019

• taxies

  Public
  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Dec 10, 2018Dec 10, 2018

• docker-rstudio

  Public
  0•0•0•0•Updated Apr 11, 2016Apr 11, 2016

• phylorelief

  Public
  Python

  •

  GNU General Public License v3.0

  •0•0•2•0•Updated Feb 27, 2015Feb 27, 2015

• phylorelief-paper

  Public
  Scripts and data for "Explaining Diversity in Metagenomic Datasets by Phylogenetic-Based Feature Weighting"

  Python

  •0•0•0•0•Updated Nov 14, 2014Nov 14, 2014