Tests

Mypy fixes + ensure predictions.csv is populated by fasta adjudication #212

	name: Tests
	on: [push]

	jobs:
	build:
	name: Run Python Tests
	runs-on: ubuntu-latest

	steps:

	- uses: actions/checkout@v2

	- name: Setup timezone
	uses: zcong1993/setup-timezone@master
	with:
	timezone: UTC

	- name: Set up Python 3.10
	uses: actions/setup-python@v2
	with:
	python-version: '3.10'

	- name: Install Python dependencies
	run: \|
	python3 -m pip install --upgrade pip
	pip3 install .

	- name: Test with pytest
	run: \|
	pytest --exitfirst --verbose --failed-first \
	--cov=. --cov-report html

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