update 0.2.19

parklab · Mar 1, 2021 · a9c219d · a9c219d
1 parent 129bc46
commit a9c219d
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Showing 23 changed files with 7 additions and 6 deletions.
diff --git a/pack.sh b/pack.sh
@@ -2,5 +2,5 @@ pip uninstall -y bamsnap
 rm -rf build
 rm -rf ./dist/*
 python3 setup.py sdist bdist_wheel
-pip install ./dist/bamsnap-0.2.18-py3-none-any.whl
+pip install ./dist/bamsnap-0.2.19-py3-none-any.whl
 # twine upload dist/*
diff --git a/setup.py b/setup.py
@@ -20,7 +20,7 @@
 }
 
 setup(name='bamsnap',
-      version='0.2.18',
+      version='0.2.19',
       url='https://github.com/danielmsk/bamsnap',
       license='MIT',
       author='Daniel Minseok Kwon',

diff --git a/src/bamsnap.egg-info/PKG-INFO b/src/bamsnap.egg-info/PKG-INFO
@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bamsnap
-Version: 0.2.18
+Version: 0.2.19
 Summary: A converter from .bam to .png for specific genomic region.
 Home-page: https://github.com/danielmsk/bamsnap
 Author: Daniel Minseok Kwon

diff --git a/src/bamsnap/_options.py b/src/bamsnap/_options.py
@@ -9,7 +9,8 @@
 
 def postprocessing_option(opt):
     if 'out' in opt.keys() and (('logfile' not in opt.keys()) or (opt['logfile'] == "")):
-        opt['logfile'] = os.path.join(opt['out'] + '_bamsnap.log')
+        # opt['logfile'] = os.path.join(opt['out'] + '_bamsnap.log')
+        opt['logfile'] = ""
     return opt
 
 

diff --git a/src/bamsnap/data/conf.json b/src/bamsnap/data/conf.json
@@ -1,7 +1,7 @@
 {
     "TITLE":"BAMSNAP",
-    "VERSION":"0.2.18",
-    "VERSION_DATE":"2021-02-21",
+    "VERSION":"0.2.19",
+    "VERSION_DATE":"2021-03-02",
     "PROG":"bamsnap",
     "options":[
         {"param":"bam", "default":[], "nargs":"*", "action": null, "choices":null, "type":null, "help":"bam or cram file(s)"},

diff --git a/tests/out/test_SV1-7/chr1:37775740.png → tests/out/test_SV1-7.png b/tests/out/test_SV1-7/chr1:37775740.png → tests/out/test_SV1-7.png
diff --git a/tests/out/test_SV1-7.zip b/tests/out/test_SV1-7.zip
diff --git a/tests/out/test_SV1-7/chr1:37775780.png b/tests/out/test_SV1-7/chr1:37775780.png
diff --git a/tests/out/test_SV1-7/chr1:37775783.png b/tests/out/test_SV1-7/chr1:37775783.png
diff --git a/tests/out/test_SV1-7/chr1:37775785.png b/tests/out/test_SV1-7/chr1:37775785.png
diff --git a/tests/out/test_SV1-7/chr1:37775789.png b/tests/out/test_SV1-7/chr1:37775789.png
diff --git a/tests/out/test_SV1-7_proc1.zip b/tests/out/test_SV1-7_proc1.zip
diff --git a/tests/out/test_SV1-7_proc1/chr1:37775740.png b/tests/out/test_SV1-7_proc1/chr1:37775740.png
diff --git a/tests/out/test_SV1-7_proc1/chr1:37775780.png b/tests/out/test_SV1-7_proc1/chr1:37775780.png
diff --git a/tests/out/test_SV1-7_proc1/chr1:37775783.png b/tests/out/test_SV1-7_proc1/chr1:37775783.png
diff --git a/tests/out/test_SV1-7_proc1/chr1:37775785.png b/tests/out/test_SV1-7_proc1/chr1:37775785.png
diff --git a/tests/out/test_SV1-7_proc1/chr1:37775789.png b/tests/out/test_SV1-7_proc1/chr1:37775789.png
diff --git a/tests/out/test_SV1-7_proc2.zip b/tests/out/test_SV1-7_proc2.zip
diff --git a/tests/out/test_SV1-7_proc2/chr1:37775740.png b/tests/out/test_SV1-7_proc2/chr1:37775740.png
diff --git a/tests/out/test_SV1-7_proc2/chr1:37775780.png b/tests/out/test_SV1-7_proc2/chr1:37775780.png
diff --git a/tests/out/test_SV1-7_proc2/chr1:37775783.png b/tests/out/test_SV1-7_proc2/chr1:37775783.png
diff --git a/tests/out/test_SV1-7_proc2/chr1:37775785.png b/tests/out/test_SV1-7_proc2/chr1:37775785.png
diff --git a/tests/out/test_SV1-7_proc2/chr1:37775789.png b/tests/out/test_SV1-7_proc2/chr1:37775789.png