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Update usage.md and nextflow_schema.json removing enable_conda and us…
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…e_mamba params
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peterk87 committed Aug 2, 2023
1 parent 6838c98 commit 02db6ba
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14 changes: 0 additions & 14 deletions docs/usage.md
Original file line number Diff line number Diff line change
Expand Up @@ -311,20 +311,6 @@ Do not use coloured log outputs.

Directory to keep pipeline Nextflow logs and reports.

#### `--enable_conda`

- Optional
- Type: boolean

Run this workflow with Conda. You can also use '-profile conda' instead of providing this parameter.

#### `--use_mamba`

- Optional
- Type: boolean

Use Mamba in place of Conda for faster Conda env creation.

#### `--singularity_pull_docker_container`

- Optional
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14 changes: 0 additions & 14 deletions nextflow_schema.json
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Expand Up @@ -269,20 +269,6 @@
"fa_icon": "fas fa-cogs",
"hidden": true
},
"enable_conda": {
"type": "boolean",
"description": "Run this workflow with Conda. You can also use '-profile conda' instead of providing this parameter.",
"default": false,
"hidden": true,
"fa_icon": "fas fa-bacon"
},
"use_mamba": {
"type": "boolean",
"description": "Use Mamba in place of Conda for faster Conda env creation.",
"default": false,
"hidden": true,
"fa_icon": "fas fa-speedometer"
},
"singularity_pull_docker_container": {
"type": "boolean",
"description": "Instead of directly downloading Singularity images for use with Singularity, force the workflow to pull and convert Docker containers instead.",
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