Update multiqc_config.yaml

assets/multiqc_config.yaml

@@ -4,16 +4,17 @@ report_comment: >
  analysis pipeline. For information about how to interpret these results, please see the
  <a href="https://github.com/CFIA-NCFAD/nf-flu" target="_blank">documentation</a>.
 report_section_order:
- software_versions:
+ CFIA-NCFAD-nf-flu-summary-module:
  order: -1000
- CFIA-NCFAD-nf-flu-summary:
+ software_versions-module:
  order: -1001
 
 read_count_multiplier: 1.0
 read_count_prefix: ''
 read_count_desc: ''
 
 export_plots: true
+disable_version_detection: true
 
 module_order:
  - samtools:
@@ -48,32 +49,21 @@ mosdepth_config:
  - 30
  - 10000
 
-run_modules:
- - custom_content
- - samtools
- - mosdepth
- - bcftools
-
-sp:
- mosdepth/global_dist:
- fn: '*.global.dist.txt'
-
 table_columns_visible:
- 'Samtools (Minimap2)':
+ 'Samtools (Minimap2): stats':
  flagstat_total: false
  mapped_passed: false
  error_rate: false
  'non-primary_alignments': false
- 'Bcftools Stats':
+ 'Bcftools Stats: Stats':
  number_of_MNPs: true
 
-
 table_columns_placement:
- 'Samtools (Minimap2)':
+ 'Samtools (Minimap2): stats':
  reads_mapped: 1010
  raw_total_sequences: 1020
  reads_mapped_percent: 1030
- 'Bcftools Stats':
+ 'Bcftools Stats: Stats':
  number_of_records: 1060
  number_of_SNPs: 1070
  number_of_MNPs: 1080