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Merge pull request #4 from pirovc/dev
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v1.1.1 fix gtdb new release url ar53 from ar122
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pirovc authored Apr 19, 2022
2 parents 07bc278 + 0a7f9e4 commit 5466f76
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2 changes: 1 addition & 1 deletion LICENSE
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MIT License

Copyright (c) 2021 Vitor C. Piro
Copyright (c) 2022 Vitor C. Piro - pirovc.github.io

Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
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5 changes: 3 additions & 2 deletions multitax/gtdbtx.py
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class GtdbTx(MultiTax):
_default_urls = ["https://data.ace.uq.edu.au/public/gtdb/data/releases/latest/ar122_taxonomy.tsv.gz",
"https://data.ace.uq.edu.au/public/gtdb/data/releases/latest/bac120_taxonomy.tsv.gz"]

_default_urls = ["https://data.gtdb.ecogenomic.org/releases/latest/ar53_taxonomy.tsv.gz",
"https://data.gtdb.ecogenomic.org/releases/latest/bac120_taxonomy.tsv.gz"]
_rank_codes = [("d__", "domain"),
("p__", "phylum"),
("c__", "class"),
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2 changes: 1 addition & 1 deletion multitax/multitax.py
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class MultiTax(object):

version = "1.1.0"
version = "1.1.1"

_default_urls = []
_default_root_node = "1"
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4 changes: 2 additions & 2 deletions setup.py
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setup(
name="multitax",
version="1.1.0",
version="1.1.1",
url="https://www.github.com/pirovc/multitax",
license='MIT',

author="Vitor C. Piro",
author_email="pirovc@posteo.net",

description="Python package to obtain, parse and explore biological taxonomies",
description="Python package to obtain, parse and explore biological and custom taxonomies",
long_description=long_description,
long_description_content_type="text/markdown",

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