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This repository contains notebooks used for the the Moving Beyond Memorization workshop on September 24, 2024.

🖥️ Where

Online

Join the P(L)INDER user group Discord Server!

⏰ When

24 September 2024

  • 15:00 - 20:30 CEST (Central European Summer Time)
  • 09:00 - 14:30 EDT (Eastern Daylight Time)
  • 06:00 - 11:30 PDT (Pacific Daylight Time)
  • 17:00 - 22:30 IDT (Israel Daylight Time)
  • 18:30 - 00:00+1 IST (India Standard Time)

📚 Prerequisites

  • Familiarity with topics covered in the PINDER and PLINDER papers
  • Interest in strategies for reducing leakage and how they can improve your models
  • Passion for developing next-generation structure and complex prediction methods

📅 Agenda

Time (in CET) Duration (in min) Session Slides Video Notebook
15:00 - 15:15 15 Welcome and Introduction Slides YouTube
15:15 - 16:00 45 Connected concepts in datasets, benchmarking and training Slides YouTube
16:00 - 16:35 35 Metrics for measuring protein and complex model accuracy Slides YouTube Open In Colab
16:35 - 16:40 5 Intro to parallel sessions YouTube
16:40 - 17:00 20 Break
17:00 - 18:30 90 PINDER YouTube Open In Colab
17:00 - 18:30 90 PLINDER YouTube Open In Colab
18:30 - 19:00 30 Break
19:00 - 20:00 60 Huggingface models and leaderboard submission Slides YouTube
20:00 - 20:20 20 Feedback and next steps YouTube
20:20 - 20:30 10 Closing remarks

This work is licensed under a Creative Commons Attribution 4.0 International License.

CC BY 4.0

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