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Requirements: 1) Install Anaconda 2) Open a terminal 3) Clone repository git clone https://github.com/preste-ai/BBB.git 4) In the terminal navigate to the project root folder cd path/BBB 5) Create environment using Anaconda and activate it conda create --name bbb --file spec-file.txt conda activate bbb Usage: 1) Paste the SMILES for molecules for which predictions to be made in the following file data/predictions/input.csv 2) Insert the output to predict in the "target" from "predictions" section of parameters.json. Three values of output are possible: "substrates", "inhibitorsA2", "inhibitorsB1" 3) Run script for getting predictions using following syntax: python3 run_predictions.py 4) Find the predictions in the *.csv files of data/predictions/output directory
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A modelisation of Blood Brain Barrier permeability through active transporters
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