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fix typo

fix typo #13

name: CI/CD Pipeline
on:
push:
branches:
- main
- "ci-*"
pull_request:
branches:
- main
jobs:
check_code_quality:
name: Check Code Quality
runs-on: ubuntu-latest
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Set up Python 3.8
uses: actions/setup-python@v5
with:
python-version: "3.8"
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install .[quality]
- name: Run Ruff code quality checks
run: |
ruff check tests src setup.py --output-format=github
ruff format --check tests src setup.py
tests:
needs: check_code_quality
strategy:
matrix:
test: [unit]
os: [ubuntu-latest, windows-latest]
python-version: ["3.8", "3.9", "3.10", "3.11"]
runs-on: ${{ matrix.os }}
continue-on-error: ${{ matrix.test == 'integration' }}
steps:
- name: Checkout repository
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install uv --upgrade
uv pip install --system "biosets[test] @ ."
- name: Run Tests
run: |
mkdir -p reports/${{ matrix.test }}_tests
python3 -m pytest -m ${{ matrix.test }} -n 2 --dist loadfile -sv ./tests/ --junitxml=reports/${{ matrix.test }}_tests/results.xml
- name: Upload Unit Test Results
uses: actions/upload-artifact@v3
with:
name: ${{ matrix.test }}-test-reports
path: reports/${{ matrix.test }}_tests/results.xml