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Expand Up @@ -89,38 +89,38 @@ Solves a 2D Laplace problem using Finite Differences methods. The code is adapte

Runs a molecular dynamics simulation. The code is adapted from examples written by [J. Burkardt](https://people.sc.fsu.edu/~jburkardt/py_src/py_src.html)
## Development branch results
### Performance Comparison (as of Tue May 14 07:17:52 UTC 2024)
### Performance Comparison (as of Wed May 22 15:30:51 UTC 2024)
## Compilation time
Algorithm | python | pythran_gnu | pythran_intel | numba | pyccel_fortran_gnu | pyccel_c_gnu | pyccel_fortran_intel | pyccel_c_intel
------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | -------------------------
Ackermann | - | 2.48 | - | 0.34 | 1.31 | 1.27 | 1.41 | 1.37
Bellman Ford | - | 3.61 | - | 1.15 | 3.72 | 4.00 | 3.85 | 4.53
Dijkstra | - | 2.55 | - | 1.67 | 3.77 | 4.05 | 3.94 | 4.64
Euler | - | 2.97 | - | 2.15 | 3.65 | 3.99 | 3.80 | 4.65
Midpoint Explicit | - | 3.34 | - | 3.18 | 3.98 | 4.30 | 4.04 | 4.73
Midpoint Fixed | - | 3.77 | - | 3.40 | 4.01 | 4.40 | 4.18 | 4.85
RK4 | - | 4.07 | - | 4.00 | 4.43 | 4.79 | 4.58 | 5.30
FD - L Convection | - | 2.51 | - | 0.92 | 3.64 | 3.99 | 3.92 | 4.51
FD - NL Convection | - | 3.64 | - | 0.95 | 3.74 | 4.11 | 3.93 | 4.63
FD - Poisson | - | 3.67 | - | 1.41 | 3.79 | 4.09 | 4.43 | 4.54
FD - Laplace | - | 7.09 | - | 3.22 | 4.15 | 4.48 | 4.38 | 5.05
M-D | - | 6.83 | - | 4.27 | 4.51 | 4.69 | 4.70 | 5.51
Ackermann | - | 2.29 | - | 0.32 | 1.27 | 1.23 | 1.32 | 1.37
Bellman Ford | - | 3.46 | - | 1.12 | 3.60 | 3.87 | 3.75 | 4.43
Dijkstra | - | 2.42 | - | 1.61 | 3.69 | 3.90 | 3.86 | 4.43
Euler | - | 2.75 | - | 2.06 | 3.61 | 3.91 | 3.73 | 4.39
Midpoint Explicit | - | 3.06 | - | 3.02 | 3.84 | 4.19 | 3.95 | 4.59
Midpoint Fixed | - | 3.48 | - | 3.23 | 3.90 | 4.21 | 4.04 | 4.78
RK4 | - | 3.85 | - | 3.79 | 4.37 | 4.67 | 4.51 | 5.13
FD - L Convection | - | 2.34 | - | 0.88 | 3.61 | 3.90 | 3.73 | 4.36
FD - NL Convection | - | 3.37 | - | 0.91 | 3.57 | 3.90 | 3.75 | 4.41
FD - Poisson | - | 3.50 | - | 1.36 | 3.76 | 4.03 | 4.35 | 4.53
FD - Laplace | - | 6.72 | - | 3.16 | 4.16 | 4.40 | 4.31 | 4.96
M-D | - | 6.69 | - | 4.10 | 4.48 | 4.63 | 4.61 | 5.40

## Execution time
Algorithm | python | pythran_gnu | pythran_intel | numba | pyccel_fortran_gnu | pyccel_c_gnu | pyccel_fortran_intel | pyccel_c_intel
------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | -------------------------
Ackermann (ms) | 311.00 | 2.95 | - | 9.59 | 1.50 | 1.50 | 8.42 | 4.33
Bellman Ford (ms) | 1940.00 | 4.18 | - | 3.90 | 2.98 | 6.15 | 4.21 | 18.30
Dijkstra (ms) | 4890.00 | 25.20 | - | 20.90 | 20.50 | 31.70 | 25.10 | 22.70
Euler (ms) | 3880.00 | 30.50 | - | 40.40 | 15.10 | 145.00 | 15.10 | 128.00
Midpoint Explicit (ms) | 7830.00 | 59.60 | - | 78.80 | 23.10 | 373.00 | 15.60 | 253.00
Midpoint Fixed (ms) | 40000.00 | 255.00 | - | 398.00 | 75.80 | 1390.00 | 59.40 | 1270.00
RK4 (ms) | 20100.00 | 164.00 | - | 144.00 | 34.70 | 488.00 | 38.70 | 407.00
FD - L Convection (ms) | 2250.00 | 1.63 | - | 2.67 | 1.46 | 1.84 | 1.51 | 3.68
FD - NL Convection (ms) | 2790.00 | 1.84 | - | 2.92 | 1.80 | 2.20 | 1.39 | 3.75
FD - Poisson (ms) | 6390.00 | 2.98 | - | 7.15 | 2.82 | 3.82 | 2.65 | 7.75
FD - Laplace (ms) | 572.00 | 64.10 | - | 247.00 | 63.00 | 259.00 | 63.20 | 328.00
M-D (ms) | 14900.00 | 15.30 | - | 59.20 | 53.90 | 59.10 | 78.10 | 62.30
Ackermann (ms) | 296.00 | 2.95 | - | 9.61 | 1.55 | 1.50 | 8.90 | 3.93
Bellman Ford (ms) | 1890.00 | 5.39 | - | 3.86 | 3.00 | 6.04 | 4.27 | 18.20
Dijkstra (ms) | 5060.00 | 34.60 | - | 21.70 | 18.70 | 30.20 | 24.50 | 23.20
Euler (ms) | 3860.00 | 41.80 | - | 37.50 | 14.90 | 144.00 | 14.10 | 130.00
Midpoint Explicit (ms) | 7790.00 | 84.50 | - | 83.30 | 24.00 | 284.00 | 15.40 | 252.00
Midpoint Fixed (ms) | 39500.00 | 271.00 | - | 375.00 | 75.70 | 1400.00 | 60.70 | 1230.00
RK4 (ms) | 19600.00 | 174.00 | - | 145.00 | 33.40 | 486.00 | 38.50 | 405.00
FD - L Convection (ms) | 2270.00 | 1.52 | - | 2.88 | 1.47 | 1.85 | 1.29 | 3.69
FD - NL Convection (ms) | 2810.00 | 1.96 | - | 2.82 | 1.66 | 2.19 | 1.52 | 3.74
FD - Poisson (ms) | 6300.00 | 3.52 | - | 7.28 | 2.79 | 3.86 | 2.67 | 7.12
FD - Laplace (ms) | 581.00 | 66.70 | - | 246.00 | 63.10 | 259.00 | 59.00 | 335.00
M-D (ms) | 14600.00 | 15.10 | - | 58.90 | 53.70 | 59.60 | 78.00 | 61.60

![Development compilation results](./version_specific_results/devel_performance_310_compilation.svg)
![Development execution results](./version_specific_results/devel_performance_310_execution.svg)
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