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Expand Up @@ -89,38 +89,38 @@ Solves a 2D Laplace problem using Finite Differences methods. The code is adapte

Runs a molecular dynamics simulation. The code is adapted from examples written by [J. Burkardt](https://people.sc.fsu.edu/~jburkardt/py_src/py_src.html)
## Development branch results
### Performance Comparison (as of Tue Sep 3 14:56:28 UTC 2024)
### Performance Comparison (as of Tue Sep 3 15:42:09 UTC 2024)
## Compilation time
Algorithm | python | pythran_gnu | pythran_intel | numba | pyccel_fortran_gnu | pyccel_c_gnu | pyccel_fortran_intel | pyccel_c_intel
------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | -------------------------
Ackermann | - | 2.36 | 2.10 | 0.33 | 1.35 | 1.25 | 1.38 | 1.34
Bellman Ford | - | 3.47 | 3.69 | 1.11 | 3.66 | 3.94 | 3.78 | 4.45
Dijkstra | - | 2.45 | 2.76 | 1.62 | 3.74 | 3.98 | 3.90 | 4.44
Euler | - | 2.73 | 3.08 | 2.07 | 3.66 | 3.97 | 3.78 | 4.40
Midpoint Explicit | - | 3.11 | 3.53 | 3.02 | 3.86 | 4.15 | 3.95 | 4.54
Midpoint Fixed | - | 3.44 | 3.80 | 3.22 | 3.89 | 4.22 | 4.01 | 4.64
RK4 | - | 3.73 | 4.13 | 3.76 | 4.33 | 4.59 | 4.45 | 5.03
FD - L Convection | - | 2.33 | 2.70 | 0.87 | 1.38 | 3.90 | 1.56 | 4.38
FD - NL Convection | - | 3.32 | 3.55 | 0.89 | 1.38 | 3.92 | 1.56 | 4.34
FD - Poisson | - | 3.40 | 3.70 | 1.33 | 1.51 | 4.02 | 2.73 | 4.45
FD - Laplace | - | 6.54 | 8.71 | 3.05 | 1.80 | 4.32 | 2.06 | 4.85
M-D | - | 6.43 | 7.69 | 4.06 | 4.36 | 4.46 | 4.55 | 5.25
Ackermann | - | 2.31 | 2.11 | 0.33 | 1.32 | 1.25 | 1.39 | 1.33
Bellman Ford | - | 3.50 | 3.76 | 1.12 | 3.73 | 4.01 | 3.85 | 4.56
Dijkstra | - | 2.50 | 2.81 | 1.68 | 3.79 | 4.05 | 4.02 | 4.58
Euler | - | 2.69 | 3.04 | 2.07 | 3.68 | 4.06 | 3.77 | 4.48
Midpoint Explicit | - | 3.10 | 3.52 | 3.10 | 3.91 | 4.24 | 4.01 | 4.56
Midpoint Fixed | - | 3.49 | 3.88 | 3.28 | 3.92 | 4.24 | 4.13 | 4.75
RK4 | - | 3.83 | 4.25 | 3.87 | 4.37 | 4.66 | 4.53 | 5.15
FD - L Convection | - | 2.41 | 2.83 | 0.89 | 1.41 | 3.99 | 1.60 | 4.49
FD - NL Convection | - | 3.53 | 3.85 | 0.95 | 1.46 | 4.01 | 1.62 | 4.51
FD - Poisson | - | 3.49 | 3.87 | 1.39 | 1.54 | 4.14 | 2.88 | 4.61
FD - Laplace | - | 6.78 | 9.14 | 3.09 | 1.83 | 4.37 | 2.10 | 4.91
M-D | - | 6.66 | 8.06 | 4.21 | 4.49 | 4.68 | 4.76 | 5.47

## Execution time
Algorithm | python | pythran_gnu | pythran_intel | numba | pyccel_fortran_gnu | pyccel_c_gnu | pyccel_fortran_intel | pyccel_c_intel
------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | -------------------------
Ackermann (ms) | 292.00 | 2.85 | 3.03 | 9.73 | 1.55 | 1.50 | 9.16 | 4.76
Bellman Ford (ms) | 1880.00 | 5.22 | 3.24 | 3.78 | 2.98 | 5.94 | - | 18.20
Dijkstra (ms) | 5150.00 | 24.80 | 17.20 | 18.90 | 18.70 | 29.70 | - | 22.30
Euler (ms) | 3810.00 | 25.40 | 24.80 | 37.90 | 15.60 | 144.00 | 13.50 | 128.00
Midpoint Explicit (ms) | 7860.00 | 52.20 | 51.10 | 77.00 | 22.70 | 281.00 | 15.40 | 250.00
Midpoint Fixed (ms) | 39100.00 | 251.00 | 91.30 | 366.00 | 75.30 | 1390.00 | 58.40 | 1230.00
RK4 (ms) | 20100.00 | 158.00 | 34.80 | 141.00 | 34.20 | 484.00 | 37.40 | 404.00
FD - L Convection (ms) | 2270.00 | 1.64 | 1.49 | 2.72 | 1.82 | 1.62 | - | 4.20
FD - NL Convection (ms) | 2780.00 | 1.76 | 1.75 | 2.78 | 2.10 | 1.98 | - | 4.15
FD - Poisson (ms) | 6230.00 | 2.98 | 5.62 | 7.15 | 2.75 | 3.80 | - | 5.63
FD - Laplace (ms) | 615.00 | 64.10 | 149.00 | 245.00 | 62.20 | 254.00 | - | 324.00
M-D (ms) | 14700.00 | 15.20 | 52.60 | 59.10 | 53.90 | 59.20 | 80.20 | 60.80
Ackermann (ms) | 289.00 | 3.14 | 3.03 | 9.77 | 1.55 | 1.50 | 8.68 | 4.76
Bellman Ford (ms) | 1840.00 | 5.21 | 3.13 | 3.79 | 2.99 | 5.96 | - | 18.40
Dijkstra (ms) | 5050.00 | 25.40 | 17.20 | 21.20 | 20.40 | 32.00 | - | 23.10
Euler (ms) | 3810.00 | 25.90 | 25.70 | 37.80 | 15.60 | 143.00 | 13.70 | 127.00
Midpoint Explicit (ms) | 7780.00 | 52.40 | 51.20 | 77.40 | 23.50 | 280.00 | 15.60 | 250.00
Midpoint Fixed (ms) | 40200.00 | 251.00 | 91.70 | 373.00 | 74.40 | 1400.00 | 60.70 | 1220.00
RK4 (ms) | 19900.00 | 159.00 | 34.80 | 135.00 | 34.30 | 495.00 | 37.20 | 401.00
FD - L Convection (ms) | 2200.00 | 1.73 | 1.51 | 2.67 | 1.52 | 1.84 | - | 4.14
FD - NL Convection (ms) | 2730.00 | 1.78 | 1.68 | 2.76 | 2.07 | 2.19 | - | 4.04
FD - Poisson (ms) | 6290.00 | 3.02 | 5.59 | 7.17 | 2.72 | 3.87 | - | 5.64
FD - Laplace (ms) | 585.00 | 67.80 | 150.00 | 244.00 | 62.30 | 282.00 | - | 325.00
M-D (ms) | 15000.00 | 15.20 | 53.20 | 58.80 | 53.90 | 59.40 | 80.10 | 61.90

![Development compilation results](./version_specific_results/devel_performance_310_compilation.svg)
![Development execution results](./version_specific_results/devel_performance_310_execution.svg)
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