CI/CD update

.github/workflows/build.yaml

@@ -11,7 +11,8 @@ on:
 jobs:
   build_wheels:
     name: Build wheels on ${{ matrix.os }}
-    needs: test
+    needs: [pre-commit, test]
+
     runs-on: ${{ matrix.os }}
     strategy:
       matrix:
@@ -22,12 +23,7 @@ jobs:
 
       - name: Build wheels
         uses: pypa/cibuildwheel@v2.16.5
-        # env:
-        #   CIBW_SOME_OPTION: value
-        #    ...
         with:
-        #   package-dir: .
-        #   output-dir: wheelhouse
           config-file: "{package}/pyproject.toml"
 
       - uses: actions/upload-artifact@v4
@@ -52,3 +48,22 @@ jobs:
       with:
         name: cibw-sdist
         path: dist/*.tar.gz
+
+  pypi-publish:
+    name: Upload release to PyPI
+    if: startsWith(github.ref, 'refs/tags/')  # only publish to PyPI on tag pushes
+    needs: [build_wheels, make_sdist]
+    runs-on: ubuntu-latest
+    environment:
+      name: pypi
+      url: https://pypi.org/p/qseek
+    permissions:
+      id-token: write  # IMPORTANT: this permission is mandatory for trusted publishing
+    steps:
+    - name: Download all the wheels and sdists
+      uses: actions/download-artifact@v3
+      with:
+        pattern: cibw-*
+        path: dist/
+    - name: Publish package distributions to PyPI
+      uses: pypa/gh-action-pypi-publish@release/v1

.github/workflows/docs.yaml

@@ -2,8 +2,6 @@ name: docs
 
 on:
   push:
-    branches:
-      - main
     tags:
       - "*"
 
@@ -12,7 +10,6 @@ permissions:
 jobs:
   deploy-docs:
     runs-on: ubuntu-latest
-    needs: build_docs
     steps:
       - uses: actions/checkout@v4
       - uses: actions/setup-python@v4

.github/workflows/tests.yaml

@@ -15,6 +15,7 @@ jobs:
       - uses: actions/checkout@v3
       - uses: actions/setup-python@v3
       - uses: pre-commit/action@v3.0.1
+
   test:
     runs-on: ubuntu-latest
     strategy:
@@ -36,6 +37,7 @@ jobs:
       - name: Test with pytest
         run: |
           pytest -m "not plot"
+
   build_docs:
     runs-on: ubuntu-latest
     needs: test
@@ -44,6 +46,8 @@ jobs:
       - uses: actions/setup-python@v4
         with:
           python-version: 3.11
+          cache: "pip" # caching pip dependencies
+          cache-dependency-path: "**/pyproject.toml"
       - run: echo "cache_id=$(date --utc '+%V')" >> $GITHUB_ENV
       - uses: actions/cache@v3
         with: