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Fix reading of Oxford Instrument's *.ebsp files with format version 6 #700

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merged 10 commits into from
Nov 20, 2024

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@hakonanes hakonanes commented Nov 19, 2024

Description of the change

This PR fixes #690.

And #701.

Progress of the PR

Minimal example of the bug fix or new feature

The map (x, y) integer positions are new files with format version 6

>>> import kikuchipy as kp
>>> s = kp.load("file.ebsp")
>>> s.original_metadata
├── beam_x = array([-28.11170417, -26.11170417, -24.11170417, -22.11170417,
       -20.1117 ...    1.88829583,
         3.88829583,   5.88829583,   7.88829583,   9.88829583])
├── beam_y = array([34.11170417, 34.11170417, 34.11170417, 34.11170417, 34.11170417,
       ... 9583,
       -3.88829583, -3.88829583, -3.88829583, -3.88829583, -3.88829583])
├── file_order = array([  1,   0,   2,   4,   3,   6,   9,   5,   7,   8,  13,  10,  11,
       ...  386, 387, 388, 389,
       391, 390, 392, 393, 396, 394, 395, 397, 398, 399])
├── map1d_id = array([  0,   1,   2,   3,   4,   5,   6,   7,   8,   9,  10,  11,  12,
       ...  386, 387, 388, 389,
       390, 391, 392, 393, 394, 395, 396, 397, 398, 399])
├── map_x = array([ 0,  1,  2,  3,  4,  5,  6,  7,  8,  9, 10, 11, 12, 13, 14, 15, 16,
    ... ,  6,  7,  8,  9, 10,
       11, 12, 13, 14, 15, 16, 17, 18, 19], dtype=int32)
└── map_y = array([ 0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,
    ... , 19, 19, 19, 19, 19,
       19, 19, 19, 19, 19, 19, 19, 19, 19], dtype=int32)

For reviewers

  • The PR title is short, concise, and will make sense 1 year later.
  • New functions are imported in corresponding __init__.py.
  • New features, API changes, and deprecations are mentioned in the unreleased
    section in CHANGELOG.rst.
  • New contributors are added to kikuchipy/__init__.py and .zenodo.json.

Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>
Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>
Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>
Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>
Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>
Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>
@hakonanes hakonanes added the bug Something isn't working label Nov 19, 2024
@hakonanes hakonanes added this to the v0.11.1 milestone Nov 19, 2024
@hakonanes hakonanes linked an issue Nov 19, 2024 that may be closed by this pull request
…y > v4

Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>
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Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>
Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>
Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>
@hakonanes hakonanes merged commit b17755b into pyxem:main Nov 20, 2024
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@hakonanes hakonanes deleted the 690-oxford-ebsp-aztec-6.1 branch November 20, 2024 19:15
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Oxford uncompressed .ebsp file load problem in Aztec V6.1
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