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# on: | ||
# push: | ||
# branches: | ||
# - master | ||
# pull_request: | ||
# branches: | ||
# - master | ||
# | ||
# name: R-CMD-check | ||
# | ||
# jobs: | ||
# R-CMD-check: | ||
# runs-on: ${{ matrix.config.os }} | ||
# | ||
# name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
# | ||
# strategy: | ||
# fail-fast: false | ||
# matrix: | ||
# config: | ||
# #- {os: macOS-latest, r: 'devel'} # takes forever to run | ||
# #- {os: macOS-latest, r: '4.0'} | ||
# #- {os: windows-latest, r: 'devel'} | ||
# - {os: windows-latest, r: '4.0'} | ||
# - {os: windows-latest, r: '3.6'} | ||
# - {os: ubuntu-18.04, r: '4.0', rspm: "https://packagemanager.rstudio.com/cran/__linux__/bionic/latest"} | ||
# - {os: ubuntu-18.04, r: '3.6', rspm: "https://packagemanager.rstudio.com/cran/__linux__/bionic/latest"} | ||
# | ||
# env: | ||
# R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | ||
# RSPM: ${{ matrix.config.rspm }} | ||
# | ||
# if: "!(contains(github.event.head_commit.message, 'ci skip')||contains(github.event.head_commit.message, 'skip ci'))" | ||
# steps: | ||
# | ||
# - uses: actions/checkout@v2 | ||
# | ||
# - uses: r-lib/actions/setup-r@master | ||
# with: | ||
# r-version: ${{ matrix.config.r }} | ||
# | ||
# - name: Query dependencies | ||
# run: | | ||
# install.packages('remotes') | ||
# saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | ||
# shell: Rscript {0} | ||
# | ||
# - name: Cache R packages | ||
# if: runner.os != 'Windows' | ||
# uses: actions/cache@v1 | ||
# with: | ||
# path: ${{ env.R_LIBS_USER }} | ||
# key: ${{ runner.os }}-r-${{ matrix.config.r }}-1-${{ hashFiles('.github/depends.Rds') }} | ||
# restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-1- | ||
# | ||
# - name: Install system dependencies | ||
# if: runner.os == 'Linux' | ||
# env: | ||
# RHUB_PLATFORM: linux-x86_64-ubuntu-gcc | ||
# run: | | ||
# Rscript -e "remotes::install_github('r-hub/sysreqs')" | ||
# sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") | ||
# sudo -s eval "$sysreqs" | ||
# | ||
# - name: Install dependencies | ||
# run: | | ||
# remotes::install_deps(dependencies = TRUE) | ||
# remotes::install_cran("rcmdcheck") | ||
# install.packages("lwgeom") # not auto-installed with sf | ||
# install.packages("units") # not auto-installed with sf | ||
# shell: Rscript {0} | ||
# | ||
# - name: Session info | ||
# run: | | ||
# options(width = 100) | ||
# pkgs <- installed.packages()[, "Package"] | ||
# sessioninfo::session_info(pkgs, include_base = TRUE) | ||
# shell: Rscript {0} | ||
# | ||
# - name: Check | ||
# env: | ||
# _R_CHECK_CRAN_INCOMING_: false | ||
# run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check") | ||
# shell: Rscript {0} | ||
# | ||
# - name: Show testthat output | ||
# if: always() | ||
# run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | ||
# shell: bash | ||
# | ||
on: | ||
push: | ||
branches: | ||
- master | ||
pull_request: | ||
branches: | ||
- master | ||
|
||
name: R-CMD-check | ||
|
||
jobs: | ||
R-CMD-check: | ||
runs-on: ${{ matrix.config.os }} | ||
|
||
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
|
||
strategy: | ||
fail-fast: false | ||
matrix: | ||
config: | ||
#- {os: macOS-latest, r: 'devel'} # takes forever to run | ||
#- {os: macOS-latest, r: '4.0'} | ||
#- {os: windows-latest, r: 'devel'} | ||
- {os: windows-latest, r: '4.0'} | ||
- {os: windows-latest, r: '3.6'} | ||
- {os: ubuntu-18.04, r: '4.0', rspm: "https://packagemanager.rstudio.com/cran/__linux__/bionic/latest"} | ||
- {os: ubuntu-18.04, r: '3.6', rspm: "https://packagemanager.rstudio.com/cran/__linux__/bionic/latest"} | ||
|
||
env: | ||
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | ||
RSPM: ${{ matrix.config.rspm }} | ||
|
||
if: "!(contains(github.event.head_commit.message, 'ci skip')||contains(github.event.head_commit.message, 'skip ci'))" | ||
steps: | ||
|
||
- uses: actions/checkout@v2 | ||
|
||
- uses: r-lib/actions/setup-r@master | ||
with: | ||
r-version: ${{ matrix.config.r }} | ||
|
||
- name: Query dependencies | ||
run: | | ||
install.packages('remotes') | ||
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | ||
shell: Rscript {0} | ||
|
||
- name: Cache R packages | ||
if: runner.os != 'Windows' | ||
uses: actions/cache@v1 | ||
with: | ||
path: ${{ env.R_LIBS_USER }} | ||
key: ${{ runner.os }}-r-${{ matrix.config.r }}-1-${{ hashFiles('.github/depends.Rds') }} | ||
restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-1- | ||
|
||
- name: Install system dependencies | ||
if: runner.os == 'Linux' | ||
env: | ||
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc | ||
run: | | ||
Rscript -e "remotes::install_github('r-hub/sysreqs')" | ||
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") | ||
sudo -s eval "$sysreqs" | ||
- name: Install dependencies | ||
run: | | ||
remotes::install_deps(dependencies = TRUE) | ||
remotes::install_cran("rcmdcheck") | ||
install.packages("lwgeom") # not auto-installed with sf | ||
install.packages("units") # not auto-installed with sf | ||
shell: Rscript {0} | ||
|
||
- name: Session info | ||
run: | | ||
options(width = 100) | ||
pkgs <- installed.packages()[, "Package"] | ||
sessioninfo::session_info(pkgs, include_base = TRUE) | ||
shell: Rscript {0} | ||
|
||
- name: Check | ||
env: | ||
_R_CHECK_CRAN_INCOMING_: false | ||
run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check") | ||
shell: Rscript {0} | ||
|
||
- name: Show testthat output | ||
if: always() | ||
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | ||
shell: bash | ||
|
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,50 +1,50 @@ | ||
# on: | ||
# push: | ||
# branches: | ||
# - master | ||
# pull_request: | ||
# branches: | ||
# - master | ||
# | ||
# name: test-coverage | ||
# | ||
# jobs: | ||
# test-coverage: | ||
# runs-on: ubuntu-20.04 | ||
# steps: | ||
# - uses: actions/checkout@v2 | ||
# | ||
# - uses: r-lib/actions/setup-r@master | ||
# | ||
# - uses: r-lib/actions/setup-pandoc@master | ||
# | ||
# - name: Query dependencies | ||
# run: | | ||
# install.packages('remotes') | ||
# saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | ||
# writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | ||
# shell: Rscript {0} | ||
# | ||
# - name: Cache R packages | ||
# uses: actions/cache@v2 | ||
# with: | ||
# path: ${{ env.R_LIBS_USER }} | ||
# key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | ||
# restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | ||
# | ||
# - name: Install system dependencies | ||
# run: | | ||
# while read -r cmd | ||
# do | ||
# eval sudo $cmd | ||
# done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))') | ||
# - name: Install dependencies | ||
# run: | | ||
# install.packages(c("remotes")) | ||
# remotes::install_deps(dependencies = TRUE) | ||
# remotes::install_cran("covr") | ||
# shell: Rscript {0} | ||
# | ||
# - name: Test coverage | ||
# run: covr::codecov() | ||
# shell: Rscript {0} | ||
on: | ||
push: | ||
branches: | ||
- master | ||
pull_request: | ||
branches: | ||
- master | ||
|
||
name: test-coverage | ||
|
||
jobs: | ||
test-coverage: | ||
runs-on: ubuntu-20.04 | ||
steps: | ||
- uses: actions/checkout@v2 | ||
|
||
- uses: r-lib/actions/setup-r@master | ||
|
||
- uses: r-lib/actions/setup-pandoc@master | ||
|
||
- name: Query dependencies | ||
run: | | ||
install.packages('remotes') | ||
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | ||
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | ||
shell: Rscript {0} | ||
|
||
- name: Cache R packages | ||
uses: actions/cache@v2 | ||
with: | ||
path: ${{ env.R_LIBS_USER }} | ||
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | ||
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | ||
|
||
- name: Install system dependencies | ||
run: | | ||
while read -r cmd | ||
do | ||
eval sudo $cmd | ||
done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))') | ||
- name: Install dependencies | ||
run: | | ||
install.packages(c("remotes")) | ||
remotes::install_deps(dependencies = TRUE) | ||
remotes::install_cran("covr") | ||
shell: Rscript {0} | ||
|
||
- name: Test coverage | ||
run: covr::codecov() | ||
shell: Rscript {0} |