handling MPL deprecation to set fig window title

visualqc/alignment.py

@@ -26,7 +26,7 @@
 from visualqc.interfaces import BaseReviewInterface
 from visualqc.utils import check_finite_int, check_id_list, check_input_dir_alignment, \
  check_out_dir, check_outlier_params, check_views, get_axis, pick_slices, read_image, \
- scale_0to1, check_time
+ scale_0to1, check_time, set_fig_window_title
 from visualqc.workflows import BaseWorkflowVisualQC
 from visualqc.image_utils import overlay_edges, mix_color, diff_image, mix_slices_in_checkers
 
@@ -345,9 +345,9 @@ def open_figure(self):
  self.fig, self.axes = plt.subplots(self.num_rows, self.num_cols,
  figsize=self.figsize)
  self.axes = self.axes.flatten()
-
- self.fig.canvas.set_window_title('VisualQC Alignment : {} {} {} '
-  ''.format(self.in_dir, self.image1_name, self.image2_name))
+ set_fig_window_title(
+  self.fig, 'VisualQC Alignment : {} {} {} '
+ ''.format(self.in_dir, self.image1_name, self.image2_name))
 
  # vmin/vmax are controlled, because we rescale all to [0, 1]
  self.display_params = dict(interpolation='none', aspect='equal', origin='lower',

visualqc/defacing.py

@@ -19,9 +19,10 @@
 from visualqc import config as cfg
 from visualqc.image_utils import rescale_without_outliers
 from visualqc.interfaces import BaseReviewInterface
-from visualqc.utils import (check_inputs_defacing, check_out_dir,
- compute_cell_extents_grid, pixdim_nifti_header,
- read_image, slice_aspect_ratio, check_event_in_axes)
+from visualqc.utils import (check_event_in_axes, check_inputs_defacing,
+ check_out_dir, compute_cell_extents_grid,
+ pixdim_nifti_header, read_image, set_fig_window_title,
+ slice_aspect_ratio)
 from visualqc.workflows import BaseWorkflowVisualQC
 
 
@@ -355,9 +356,8 @@ def init_layout(self,
  bounding_rect=cfg.bbox_defacing_MRI_review,
  figsize=self.figsize)
  self.fig = self.collage.fig
- self.fig.canvas.set_window_title('VisualQC defacing : {} {} '
- ''.format(self.in_dir,
- self.defaced_name))
+ set_fig_window_title(
+ self.fig, f'VisualQC defacing : {self.in_dir} {self.defaced_name} ')
 
  self.padding = padding
 

visualqc/diffusion.py

@@ -10,23 +10,23 @@
 import time
 import warnings
 from abc import ABC
+from os.path import basename, join as pjoin
 from textwrap import wrap
 
 import nibabel as nib
 import numpy as np
 from matplotlib import pyplot as plt
 from matplotlib.widgets import CheckButtons, RadioButtons
 from mrivis.utils import crop_image
-from os.path import basename, join as pjoin
+
 from visualqc import config as cfg
 from visualqc.image_utils import dwi_overlay_edges
 from visualqc.readers import diffusion_traverse_bids
 from visualqc.t1_mri import T1MriInterface
 from visualqc.utils import (check_bids_dir, check_finite_int, check_image_is_4d,
  check_out_dir, check_outlier_params, check_time,
- check_views, get_axis,
- pick_slices,
- scale_0to1)
+ check_views, get_axis, pick_slices, scale_0to1,
+ set_fig_window_title)
 from visualqc.workflows import BaseWorkflowVisualQC
 
 
@@ -420,9 +420,8 @@ def open_figure(self):
 
  # 1. main carpet, in the background
  self.fig, self.ax_carpet = plt.subplots(1, 1, figsize=self.figsize)
- self.fig.canvas.set_window_title('VisualQC Diffusion MRI :'
- ' {}'.format(self.in_dir))
-
+ set_fig_window_title(
+ self.fig, f'VisualQC Diffusion MRI : {self.in_dir} ')
  self.ax_carpet.set_zorder(self.layer_order_carpet)
  # vmin/vmax are controlled, because we rescale all to [0, 1]
  self.imshow_params_carpet = dict(interpolation='none', aspect='auto',

visualqc/freesurfer.py

@@ -32,7 +32,7 @@
  check_out_dir, check_outlier_params, check_views,
  freesurfer_vis_tool_installed, get_axis,
  get_freesurfer_mri_path, get_label_set, pick_slices,
- read_image, scale_0to1,
+ read_image, scale_0to1, set_fig_window_title,
  void_subcortical_symmetrize_cortical)
 from visualqc.workflows import BaseWorkflowVisualQC
 
@@ -407,8 +407,9 @@ def open_figure(self):
  self.fig, self.axes = plt.subplots(self.num_rows_total, self.num_cols_final,
  figsize=self.figsize)
  self.axes = self.axes.flatten()
- self.fig.canvas.set_window_title('VisualQC {} {} : {}'
- ' '.format(self.vis_type, self.seg_name, self.in_dir))
+ set_fig_window_title(self.fig,
+ 'VisualQC {} {} : {} '
+ ''.format(self.vis_type, self.seg_name, self.in_dir))
 
  self.display_params_mri = dict(interpolation='none', aspect='equal',
  origin='lower',

visualqc/functional_mri.py

@@ -22,9 +22,9 @@
 from visualqc.readers import func_mri_traverse_bids
 from visualqc.t1_mri import T1MriInterface
 from visualqc.utils import (check_bids_dir, check_event_in_axes, check_finite_int,
- check_id_list_with_regex,
- check_image_is_4d, check_out_dir, check_outlier_params,
- check_views, get_axis, pick_slices, scale_0to1)
+ check_id_list_with_regex, check_image_is_4d,
+ check_out_dir, check_outlier_params, check_views,
+ get_axis, pick_slices, scale_0to1, set_fig_window_title)
 from visualqc.workflows import BaseWorkflowVisualQC
 
 
@@ -393,8 +393,7 @@ def open_figure(self):
 
  # 1. main carpet, in the background
  self.fig, self.ax_carpet = plt.subplots(1, 1, figsize=self.figsize)
- self.fig.canvas.set_window_title('VisualQC Functional MRI :'
- ' {}'.format(self.in_dir))
+ set_fig_window_title(self.fig, f'VisualQC Functional MRI : {self.in_dir}')
 
  self.ax_carpet.set_zorder(self.layer_order_carpet)
  # vmin/vmax are controlled, because we rescale all to [0, 1]

visualqc/t1_mri.py

@@ -24,7 +24,7 @@
 from visualqc.utils import (check_bids_dir, check_finite_int, check_id_list,
  check_input_dir_T1, check_out_dir, check_outlier_params,
  check_views, read_image, saturate_brighter_intensities,
- scale_0to1)
+ scale_0to1, set_fig_window_title)
 from visualqc.workflows import BaseWorkflowVisualQC
 
 
@@ -377,8 +377,8 @@ def init_layout(self, views, num_rows_per_view,
  bounding_rect=cfg.bounding_box_review,
  figsize=self.figsize)
  self.fig = self.collage.fig
- self.fig.canvas.set_window_title('VisualQC T1 MRI : {} {} '
-  ''.format(self.in_dir, self.mri_name))
+ set_fig_window_title(
+ self.fig, f'VisualQC T1w MRI : {self.in_dir} {self.mri_name}')
 
  self.padding = padding
 

visualqc/utils.py

@@ -67,6 +67,15 @@ def pixdim_nifti_header(header):
  return header['pixdim'][1:4]
 
 
+def set_fig_window_title(fig, text):
+ """Sets the title of the given figure"""
+
+ try:
+ fig.canvas.manager.set_window_title(text)
+ except: # not all backends support this, so quietly ignoring it
+ pass
+
+
 def slice_aspect_ratio(pixel_dim, axis):
  """computes aspect ratio for the cross-sectional slices of a given dimension"""