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GWAS on various Indian populations of Tribolium :

Broad Workflow:

  • Obtain reads
  • QC and MultiQC
  • Map to reference
  • Run Popoolation2 package
    • Obtain the variants
  • Run PCA
  • Run DAPC
    • Identify the distantly related populations.

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GWAS on various populations of Tribolium in India

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