ruff auto-fixes

benchmarks/skimage/_image_bench.py

@@ -23,7 +23,7 @@ def product_dict(**kwargs):
  yield dict(zip(keys, instance))
 
 
-class ImageBench(object):
+class ImageBench:
  def __init__(
  self,
  function_name,

benchmarks/skimage/cucim_color_bench.py

@@ -223,7 +223,7 @@ def main(args):
  try:
  import tabular # noqa: F401
 
- with open(fbase + ".md", "wt") as f:
+ with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())
  except ImportError:
  pass

benchmarks/skimage/cucim_exposure_bench.py

@@ -129,7 +129,7 @@ def main(args):
  fbase = os.path.splitext(pfile)[0]
  all_results.to_csv(fbase + ".csv")
  all_results.to_pickle(pfile)
- with open(fbase + ".md", "wt") as f:
+ with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())
 
 

benchmarks/skimage/cucim_feature_bench.py

@@ -218,7 +218,7 @@ def main(args):
  fbase = os.path.splitext(pfile)[0]
  all_results.to_csv(fbase + ".csv")
  all_results.to_pickle(pfile)
- with open(fbase + ".md", "wt") as f:
+ with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())
 
 

benchmarks/skimage/cucim_filters_bench.py

@@ -189,7 +189,7 @@ def main(args):
  fbase = os.path.splitext(pfile)[0]
  all_results.to_csv(fbase + ".csv")
  all_results.to_pickle(pfile)
- with open(fbase + ".md", "wt") as f:
+ with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())
 
 

benchmarks/skimage/cucim_measure_bench.py

@@ -328,7 +328,7 @@ def main(args):
  fbase = os.path.splitext(pfile)[0]
  all_results.to_csv(fbase + ".csv")
  all_results.to_pickle(pfile)
- with open(fbase + ".md", "wt") as f:
+ with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())
 
 

benchmarks/skimage/cucim_metrics_bench.py

@@ -176,7 +176,7 @@ def main(args):
  fbase = os.path.splitext(pfile)[0]
  all_results.to_csv(fbase + ".csv")
  all_results.to_pickle(pfile)
- with open(fbase + ".md", "wt") as f:
+ with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())
 
 

benchmarks/skimage/cucim_morphology_bench.py

@@ -281,7 +281,7 @@ def main(args):
  try:
  import tabular # noqa: F401
 
- with open(fbase + ".md", "wt") as f:
+ with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())
  except ImportError:
  pass

benchmarks/skimage/cucim_registration_bench.py

@@ -145,7 +145,7 @@ def main(args):
  try:
  import tabular # noqa: F401
 
- with open(fbase + ".md", "wt") as f:
+ with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())
  except ImportError:
  pass

benchmarks/skimage/cucim_restoration_bench.py

@@ -180,7 +180,7 @@ def main(args):
  try:
  import tabular # noqa: F401
 
- with open(fbase + ".md", "wt") as f:
+ with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())
  except ImportError:
  pass

benchmarks/skimage/cucim_segmentation_bench.py

@@ -296,7 +296,7 @@ def main(args):
  try:
  import tabular # noqa: F401
 
- with open(fbase + ".md", "wt") as f:
+ with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())
  except ImportError:
  pass

benchmarks/skimage/cucim_transform_bench.py

@@ -164,7 +164,7 @@ def main(args):
  try:
  import tabular # noqa: F401
 
- with open(fbase + ".md", "wt") as f:
+ with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())
  except ImportError:
  pass

benchmarks/skimage/cupyx_scipy_ndimage_filter_bench.py

@@ -129,5 +129,5 @@ def set_args(self, dtype):
 fbase = os.path.splitext(pfile)[0]
 all_results.to_csv(fbase + ".csv")
 all_results.to_pickle(pfile)
-with open(fbase + ".md", "wt") as f:
+with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())

benchmarks/skimage/cupyx_scipy_ndimage_fourier_bench.py

@@ -50,5 +50,5 @@ def set_args(self, dtype):
 fbase = os.path.splitext(pfile)[0]
 all_results.to_csv(fbase + ".csv")
 all_results.to_pickle(pfile)
-with open(fbase + ".md", "wt") as f:
+with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())

benchmarks/skimage/cupyx_scipy_ndimage_interp_bench.py

@@ -153,5 +153,5 @@ def set_args(self, dtype):
 fbase = os.path.splitext(pfile)[0]
 all_results.to_csv(fbase + ".csv")
 all_results.to_pickle(pfile)
-with open(fbase + ".md", "wt") as f:
+with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())

benchmarks/skimage/cupyx_scipy_ndimage_measurements_bench.py

@@ -185,5 +185,5 @@ def set_args(self, dtype):
 fbase = os.path.splitext(pfile)[0]
 all_results.to_csv(fbase + ".csv")
 all_results.to_pickle(pfile)
-with open(fbase + ".md", "wt") as f:
+with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())

benchmarks/skimage/cupyx_scipy_ndimage_morphology_bench.py

@@ -152,5 +152,5 @@ def set_args(self, dtype):
 fbase = os.path.splitext(pfile)[0]
 all_results.to_csv(fbase + ".csv")
 all_results.to_pickle(pfile)
-with open(fbase + ".md", "wt") as f:
+with open(fbase + ".md", "w") as f:
  f.write(all_results.to_markdown())

cpp/plugins/cucim.kit.cuslide/src/cuslide/jpeg2k/gen_color_table.py

@@ -138,7 +138,7 @@ def gen_b_cb():
  """
  b_cb = [0] * 256
  for i in range(256):
- b_cb[i] = int((1.77204 * (i - 128)))
+ b_cb[i] = int(1.77204 * (i - 128))
  return b_cb
 
 

docs/source/conf.py

@@ -1,5 +1,4 @@
 #!/usr/bin/env python3
-# -*- coding: utf-8 -*-
 #
 # Copyright (c) 2018, NVIDIA CORPORATION.
 #
@@ -21,9 +20,9 @@
 #
 import os
 import sys
-from packaging.version import Version
 
 import cucim
+from packaging.version import Version
 
 sys.path.insert(0, os.path.abspath("../.."))
 curpath = os.path.dirname(__file__)

examples/python/gds_whole_slide/lz4_nvcomp.py

@@ -66,9 +66,7 @@ def ensure_contiguous_ndarray(buf, max_buffer_size=None, flatten=True):
  raise ValueError("an array with contiguous memory is required")
 
  if max_buffer_size is not None and arr.nbytes > max_buffer_size:
- msg = "Codec does not support buffers of > {} bytes".format(
- max_buffer_size
- )
+ msg = f"Codec does not support buffers of > {max_buffer_size} bytes"
  raise ValueError(msg)
 
  return arr

experiments/Supporting_Aperio_SVS_Format/benchmark.py

@@ -40,7 +40,7 @@ def __enter__(self):
  def __exit__(self, exc_type, exc, exc_tb):
  if not self.end:
  self.elapsed_time()
- print("{} : {}".format(self.message, self.end - self.start))
+ print(f"{self.message} : {self.end - self.start}")
 
 
 def load_tile_openslide(slide, start_loc, patch_size):

experiments/Using_Cache/benchmark.py

@@ -42,7 +42,7 @@ def __enter__(self):
  def __exit__(self, exc_type, exc, exc_tb):
  if not self.end:
  self.elapsed_time()
- print("{} : {}".format(self.message, self.end - self.start))
+ print(f"{self.message} : {self.end - self.start}")
 
 
 def load_tile_openslide(slide, start_loc, patch_size):