Merge pull request #47 from rapidsai/branch-21.06

[RELEASE] cucim v21.06

3rdparty/LICENSE.libcuckoo

@@ -0,0 +1,18 @@
+Copyright (C) 2013, Carnegie Mellon University and Intel Corporation
+
+Licensed under the Apache License, Version 2.0 (the "License");
+you may not use this file except in compliance with the License.
+You may obtain a copy of the License at
+
+     http://www.apache.org/licenses/LICENSE-2.0
+
+Unless required by applicable law or agreed to in writing, software
+distributed under the License is distributed on an "AS IS" BASIS,
+WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+See the License for the specific language governing permissions and
+limitations under the License.
+
+---------------------------
+
+The third-party libraries have their own licenses, as detailed in their source
+files.

CHANGELOG.md

@@ -1,3 +1,16 @@
+# cuCIM 21.06.00 (9 Jun 2021)
+
+## 🐛 Bug Fixes
+
+- Update `update-vesion.sh` ([#42](https://github.com/rapidsai/cucim/pull/42)) [@ajschmidt8](https://github.com/ajschmidt8)
+
+## 🛠️ Impovements
+
+- Update envionment vaiable used to detemine `cuda_vesion` ([#43](https://github.com/rapidsai/cucim/pull/43)) [@ajschmidt8](https://github.com/ajschmidt8)
+- Update vesion scipt to emove bump2vesion dependency ([#41](https://github.com/rapidsai/cucim/pull/41)) [@gigony](https://github.com/gigony)
+- Update changelog ([#40](https://github.com/rapidsai/cucim/pull/40)) [@ajschmidt8](https://github.com/ajschmidt8)
+- Update docs build scipt ([#39](https://github.com/rapidsai/cucim/pull/39)) [@ajschmidt8](https://github.com/ajschmidt8)
+
 # cuCIM 0.19.0 (15 Apr 2021)
 
 Initial release of cuCIM including cuClaraImage and [cupyimg](https://github.com/mritools/cupyimg).

CMakeLists.txt

@@ -105,6 +105,7 @@ include(ExternalProject)
 ################################################################################
 option(CUCIM_SUPPORT_GDS "Support cufile library" OFF)
 option(CUCIM_STATIC_GDS "Use static cufile library" OFF)
+option(CUCIM_SUPPORT_CUDA "Support CUDA" ON)
 
 # Setup CXX11 ABI
 # : Adds CXX11 ABI definition to the compiler command line for targets in the current directory,
@@ -124,6 +125,8 @@ superbuild_depend(openslide)
 superbuild_depend(catch2)
 superbuild_depend(cli11)
 superbuild_depend(json)
+superbuild_depend(libcuckoo)
+superbuild_depend(boost-header-only)
 
 ################################################################################
 # Define some names

CONTRIBUTING.md

@@ -58,18 +58,17 @@ The following instructions are for developers and contributors to cuCIM OSS deve
 
 #### Python
 
-cuCIM uses [Black](https://black.readthedocs.io/en/stable/),
-[isort](https://readthedocs.org/projects/isort/), and
+cuCIM uses [isort](https://readthedocs.org/projects/isort/), and
 [flake8](http://flake8.pycqa.org/en/latest/) to ensure a consistent code format
-throughout the project. `Black`, `isort`, and `flake8` can be installed with
+throughout the project. `isort`, and `flake8` can be installed with
 `conda` or `pip`:
 
 ```bash
-conda install black isort flake8
+conda install isort flake8
 ```
 
 ```bash
-pip install black isort flake8
+pip install isort flake8
 ```
 
 These tools are used to auto-format the Python code in the repository. Additionally, there is a CI check in place to enforce
@@ -78,7 +77,6 @@ automatically format your python code by running:
 
 ```bash
 isort --atomic python/**/*.py
-black python
 ```
 
 ### Get libcucim Dependencies
@@ -145,3 +143,9 @@ cp -P python/install/lib/* python/cucim/src/cucim/clara/
 cd python/cucim/
 python -m pip install .
 ```
+
+For contributors interested in working on the Python code from an in-place
+(editable) installation, replace the last line above with
+```bash
+python -m pip install --editable .
+```