build(docker): upgraded docker image to ubuntu 24.04 (#211)

.github/workflows/ci.yml

@@ -10,10 +10,10 @@ on: [push, pull_request]
 
 jobs:
  lint-commitlint:
- runs-on: ubuntu-20.04
+ runs-on: ubuntu-24.04
  steps:
  - name: Checkout
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
  with:
  fetch-depth: 0
 
@@ -36,26 +36,26 @@ jobs:
  ./run-tests.sh --check-commitlint ${{ github.event.pull_request.head.sha }}~${{ github.event.pull_request.commits }} ${{ github.event.pull_request.head.sha }} ${{ github.event.pull_request.number }}
 
  lint-shellcheck:
- runs-on: ubuntu-20.04
+ runs-on: ubuntu-24.04
  steps:
  - name: Checkout
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
 
  - name: Runs shell script static analysis
  run: |
  sudo apt-get install shellcheck
  ./run-tests.sh --check-shellcheck
 
  lint-black:
- runs-on: ubuntu-20.04
+ runs-on: ubuntu-24.04
  steps:
  - name: Checkout
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
 
  - name: Setup Python
- uses: actions/setup-python@v4
+ uses: actions/setup-python@v5
  with:
- python-version: 3.8
+ python-version: "3.12"
 
  - name: Check Python code formatting
  run: |
@@ -64,15 +64,15 @@ jobs:
  ./run-tests.sh --check-black
 
  lint-flake8:
- runs-on: ubuntu-20.04
+ runs-on: ubuntu-24.04
  steps:
  - name: Checkout
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
 
  - name: Setup Python
- uses: actions/setup-python@v4
+ uses: actions/setup-python@v5
  with:
- python-version: 3.8
+ python-version: "3.12"
 
  - name: Check compliance with pep8, pyflakes and circular complexity
  run: |
@@ -81,15 +81,15 @@ jobs:
  ./run-tests.sh --check-flake8
 
  lint-pydocstyle:
- runs-on: ubuntu-20.04
+ runs-on: ubuntu-24.04
  steps:
  - name: Checkout
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
 
  - name: Setup Python
- uses: actions/setup-python@v4
+ uses: actions/setup-python@v5
  with:
- python-version: 3.8
+ python-version: "3.12"
 
  - name: Check compliance with Python docstring conventions
  run: |
@@ -98,15 +98,15 @@ jobs:
  ./run-tests.sh --check-pydocstyle
 
  lint-check-manifest:
- runs-on: ubuntu-20.04
+ runs-on: ubuntu-24.04
  steps:
  - name: Checkout
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
 
  - name: Setup Python
- uses: actions/setup-python@v4
+ uses: actions/setup-python@v5
  with:
- python-version: 3.8
+ python-version: "3.12"
 
  - name: Check Python manifest completeness
  run: |
@@ -115,15 +115,15 @@ jobs:
  ./run-tests.sh --check-manifest
 
  docs-sphinx:
- runs-on: ubuntu-20.04
+ runs-on: ubuntu-24.04
  steps:
  - name: Checkout
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
 
  - name: Setup Python
- uses: actions/setup-python@v4
+ uses: actions/setup-python@v5
  with:
- python-version: 3.8
+ python-version: "3.12"
 
  - name: Install system dependencies
  run: |
@@ -140,15 +140,15 @@ jobs:
  run: ./run-tests.sh --check-sphinx
 
  python-tests:
- runs-on: ubuntu-20.04
+ runs-on: ubuntu-24.04
  steps:
  - name: Checkout
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
 
  - name: Setup Python
- uses: actions/setup-python@v4
+ uses: actions/setup-python@v5
  with:
- python-version: 3.8
+ python-version: "3.12"
 
  - name: Install Python dependencies
  run: |
@@ -160,31 +160,31 @@ jobs:
  run: ./run-tests.sh --check-pytest
 
  - name: Codecov Coverage
- uses: codecov/codecov-action@v3
+ uses: codecov/codecov-action@v4
  with:
  token: ${{ secrets.CODECOV_TOKEN }}
  files: coverage.xml
 
  lint-dockerfile:
- runs-on: ubuntu-20.04
+ runs-on: ubuntu-24.04
  steps:
  - name: Checkout
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
 
  - name: Check Dockerfile compliance
  run: ./run-tests.sh --check-dockerfile
 
  docker-build:
- runs-on: ubuntu-20.04
+ runs-on: ubuntu-24.04
  steps:
  - name: Checkout
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
 
  - name: Build Docker image
  run: ./run-tests.sh --check-docker-build
 
  release-docker:
- runs-on: ubuntu-20.04
+ runs-on: ubuntu-24.04
  if: >
  vars.RELEASE_DOCKER == 'true' &&
  github.event_name == 'push' &&

.readthedocs.yaml

@@ -7,9 +7,9 @@
 version: 2
 
 build:
- os: ubuntu-22.04
+ os: ubuntu-24.04
  tools:
- python: "3.8"
+ python: "3.12"
 
 sphinx:
  configuration: docs/conf.py

AUTHORS.md

@@ -15,5 +15,6 @@ The list of contributors in alphabetical order:
 - [Marco Vidal](https://orcid.org/0000-0002-9363-4971)
 - [Rokas Maciulaitis](https://orcid.org/0000-0003-1064-6967)
 - [Sinclert Perez](https://www.linkedin.com/in/sinclert)
+- [Stavros Moiras](https://orcid.org/0009-0005-4331-096X)
 - [Tibor Simko](https://orcid.org/0000-0001-7202-5803)
 - [Vladyslav Moisieienkov](https://orcid.org/0000-0001-9717-0775)

Dockerfile

@@ -1,19 +1,17 @@
 # This file is part of REANA.
-# Copyright (C) 2018, 2019, 2020, 2021, 2022, 2023 CERN.
+# Copyright (C) 2018, 2019, 2020, 2021, 2022, 2023, 2024 CERN.
 #
 # REANA is free software; you can redistribute it and/or modify it
 # under the terms of the MIT License; see LICENSE file for more details.
 
 # Use Ubuntu LTS base image
-FROM docker.io/library/ubuntu:20.04
+FROM docker.io/library/ubuntu:24.04
 
 # Use default answers in installation commands
 ENV DEBIAN_FRONTEND=noninteractive
 
-# Use distutils provided by the standard Python library instead of the vendored one in
-# setuptools, so that editable installations are stored in the right directory.
-# See https://github.com/pypa/setuptools/issues/3301
-ENV SETUPTOOLS_USE_DISTUTILS=stdlib
+# Allow pip to install packages in the system site-packages dir
+ENV PIP_BREAK_SYSTEM_PACKAGES=true
 
 # Prepare list of Python dependencies
 COPY requirements.txt /code/
@@ -23,16 +21,16 @@ COPY requirements.txt /code/
 RUN apt-get update -y && \
  apt-get install --no-install-recommends -y \
  gcc \
- python3.8 \
- python3-dev \
+ python3.12 \
+ python3.12-dev \
  python3-pip \
  vim-tiny && \
- pip install --no-cache-dir --upgrade pip setuptools && \
+ pip install --no-cache-dir --upgrade setuptools && \
  pip install --no-cache-dir -r /code/requirements.txt && \
  apt-get remove -y \
  gcc \
- python3-dev && \
- apt-get autoremove -y &&  \
+ python3.12-dev && \
+ apt-get autoremove -y && \
  apt-get clean && \
  rm -rf /var/lib/apt/lists/*
 

requirements.txt

@@ -1,49 +1,55 @@
 #
-# This file is autogenerated by pip-compile with Python 3.8
+# This file is autogenerated by pip-compile with Python 3.12
 # by the following command:
 #
 # pip-compile --annotation-style=line --output-file=requirements.txt setup.py
 #
 amqp==5.2.0 # via kombu
 appdirs==1.4.4 # via fs
-attrs==23.2.0 # via jsonschema
-backports-zoneinfo[tzdata]==0.2.1 # via backports-zoneinfo, kombu
+arrow==1.3.0  # via isoduration
+attrs==23.2.0 # via jsonschema, referencing
 bracex==2.4 # via wcmatch
 bravado==10.3.2 # via reana-commons
 bravado-core==6.1.0 # via bravado, reana-commons
-certifi==2024.2.2 # via requests
+certifi==2024.7.4 # via requests
 charset-normalizer==3.3.2 # via requests
 checksumdir==1.1.9 # via reana-commons
 click==8.1.7 # via reana-commons
+fqdn==1.5.1 # via jsonschema
 fs==2.4.16 # via reana-commons
-idna==3.6 # via jsonschema, requests
-jsonpointer==2.4 # via jsonschema
+idna==3.7 # via jsonschema, requests
+importlib-resources==6.4.0 # via swagger-spec-validator
+isoduration==20.11.0 # via jsonschema
+jsonpointer==3.0.0 # via jsonschema
 jsonref==1.1.0 # via bravado-core
-jsonschema[format]==3.2.0 # via bravado-core, reana-commons, swagger-spec-validator
-kombu==5.3.5 # via reana-commons
+jsonschema[format]==4.23.0 # via bravado-core, reana-commons, swagger-spec-validator
+jsonschema-specifications==2023.12.1 # via jsonschema
+kombu==5.3.7 # via reana-commons
 markupsafe==2.1.5 # via werkzeug
 mock==3.0.5 # via reana-commons
 monotonic==1.6 # via bravado
-msgpack==1.0.7 # via bravado-core
+msgpack==1.0.8 # via bravado-core
 msgpack-python==0.5.6 # via bravado
-pyrsistent==0.20.0 # via jsonschema
-python-dateutil==2.9.0 # via bravado, bravado-core
+python-dateutil==2.9.0.post0 # via arrow, bravado, bravado-core
 pytz==2024.1 # via bravado-core
 pyyaml==6.0.1 # via bravado, bravado-core, reana-commons, swagger-spec-validator
-reana-commons==0.95.0a2 # via reana-workflow-engine-serial (setup.py)
-requests==2.31.0 # via bravado, bravado-core
+reana-commons==0.95.0a3 # via reana-workflow-engine-serial (setup.py)
+referencing==0.35.1 # via jsonschema, jsonschema-specifications
+requests==2.32.3 # via bravado, bravado-core
+rfc3339-validator==0.1.4 # via jsonschema
 rfc3987==1.3.8 # via jsonschema
+rpds-py==0.19.0 # via jsonschema, referencing
 simplejson==3.19.2 # via bravado, bravado-core
-six==1.16.0 # via bravado, bravado-core, fs, jsonschema, mock, python-dateutil
-strict-rfc3339==0.7 # via jsonschema
-swagger-spec-validator==3.0.3 # via bravado-core
-typing-extensions==4.10.0 # via bravado, kombu, swagger-spec-validator
-tzdata==2024.1  # via backports-zoneinfo
-urllib3==2.2.1 # via requests
+six==1.16.0 # via bravado, bravado-core, fs, mock, python-dateutil, rfc3339-validator
+swagger-spec-validator==3.0.4 # via bravado-core
+types-python-dateutil==2.9.0.20240316 # via arrow
+typing-extensions==4.12.2 # via bravado, swagger-spec-validator
+uri-template==1.3.0 # via jsonschema
+urllib3==2.2.2 # via requests
 vine==5.1.0 # via amqp, kombu
 wcmatch==8.4.1 # via reana-commons
-webcolors==1.13  # via jsonschema
-werkzeug==3.0.1 # via reana-commons
+webcolors==24.6.0 # via jsonschema
+werkzeug==3.0.3 # via reana-commons
 
 # The following packages are considered to be unsafe in a requirements file:
 # setuptools

setup.py

@@ -79,6 +79,7 @@
  "reana_workflow_engine_serial.tasks:run_serial_workflow",
  ]
  },
+ python_requires=">=3.8",
  install_requires=install_requires,
  extras_require=extras_require,
  setup_requires=setup_requires,
@@ -90,7 +91,7 @@
  "License :: OSI Approved :: MIT License",
  "Operating System :: OS Independent",
  "Programming Language :: Python :: 3",
- "Programming Language :: Python :: 3.8",
+ "Programming Language :: Python :: 3.12",
  "Programming Language :: Python :: Implementation :: CPython",
  "Programming Language :: Python",
  "Topic :: Internet :: WWW/HTTP :: Dynamic Content",