Update pyo3

Cargo.toml

@@ -3,10 +3,9 @@ members = ["crates/*"]
 resolver = "2"
 
 [workspace.dependencies]
-qcs-api = "0.2.1"
-qcs-api-client-common = "0.10.1"
-qcs-api-client-grpc = "0.10.1"
-qcs-api-client-openapi = "0.11.1"
+qcs-api-client-common = "0.11.1"
+qcs-api-client-grpc = "0.11.1"
+qcs-api-client-openapi = "0.12.1"
 serde_json = "1.0.86"
 thiserror = "1.0.57"
 tokio = "1.36.0"
@@ -25,11 +24,11 @@ quil-rs = { version = "0.28.1", git = "https://github.com/rigetti/quil-rs", tag
 # and need to be updated together.
 ndarray = { version = "0.15.6", features = ["serde"] }
 numpy = "0.20.0"
-pyo3 = { version = "0.20.0", features = ["extension-module"] }
-pyo3-asyncio = { version = "0.20", features = ["tokio-runtime"] }
+pyo3 = { version = "0.21.0", features = ["extension-module"] }
+pyo3-asyncio-0-21 = { version = "0.21", features = ["tokio-runtime"] }
 pyo3-log = { version = "0.8.2" }
-pyo3-opentelemetry = { version = "=0.3.2-dev.1" }
-pyo3-tracing-subscriber = { version = "=0.1.2-dev.1", default-features = true }
+pyo3-opentelemetry = { version = "0.3.4" }
+pyo3-tracing-subscriber = { version = "0.1.4", default-features = true }
 
 pyo3-build-config = "0.20.0"
 rigetti-pyo3 = { version = "0.4.1", default-features = false, features = ["complex", "time"] }
@@ -42,3 +41,7 @@ rigetti-pyo3 = { version = "0.4.1", default-features = false, features = ["compl
 strip = true
 lto = true
 codegen-units = 1
+
+[patch.crates-io]
+# XXX TEMP
+rigetti-pyo3 = { git = "https://github.com/rigetti/rigetti-pyo3", branch = "update-pyo3" }

crates/lib/Cargo.toml

@@ -28,15 +28,11 @@ ndarray.workspace = true
 num = { version = "0.4.0", features = ["serde"] }
 opentelemetry = { version = "0.23.0" }
 opentelemetry_sdk = { version = "0.23.0" }
-qcs-api.workspace = true
 qcs-api-client-common.workspace = true
 qcs-api-client-openapi.workspace = true
 qcs-api-client-grpc.workspace = true
 quil-rs.workspace = true
-reqwest = { version = "0.11.20", default-features = false, features = [
-  "rustls-tls",
-  "json",
-] }
+reqwest = { version = "0.12.8", default-features = false, features = ["rustls-tls", "json"] }
 rmp-serde = "1.1.1"
 serde = { version = "1.0.145", features = ["derive"] }
 serde_json.workspace = true
@@ -45,7 +41,7 @@ tokio = { workspace = true, features = ["fs", "rt-multi-thread"] }
 toml = "0.7.3"
 tracing = { version = "0.1", optional = true, features = ["log"] }
 uuid = { version = "1.2.1", features = ["v4"] }
-tonic = { version = "0.11.0", features = ["tls", "tls-roots"] }
+tonic = { version = "0.12.3", features = ["tls", "tls-roots"] }
 zmq = { version = "0.10.0" }
 itertools = "0.11.0"
 derive_builder = "0.12.0"

crates/python/Cargo.toml

@@ -20,12 +20,11 @@ crate-type = ["cdylib", "rlib"]
 [dependencies]
 async-trait = "0.1.73"
 qcs = { path = "../lib", features = ["tracing-opentelemetry"] }
-qcs-api.workspace = true
 qcs-api-client-common = { workspace = true, features = ["python"] }
 qcs-api-client-grpc.workspace = true
 qcs-api-client-openapi.workspace = true
 pyo3.workspace = true
-pyo3-asyncio.workspace = true
+pyo3-asyncio-0-21.workspace = true
 pyo3-opentelemetry.workspace = true
 pyo3-tracing-subscriber = { workspace = true, features = ["layer-otel-otlp-file", "layer-otel-otlp"] }
 quil-rs.workspace = true
@@ -40,11 +39,11 @@ once_cell = "1.18.0"
 opentelemetry = { version = "0.23.0" }
 opentelemetry_sdk = { version = "0.23.0" }
 tracing = { version = "0.1.37" }
-prost = "0.12.6"
+prost = "0.13.3"
 
 [build-dependencies]
 pyo3-build-config.workspace = true
-pyo3-tracing-subscriber = { version = "=0.1.2-dev.1", features = ["layer-otel-otlp-file", "layer-otel-otlp", "stubs"], default-features = false }
+pyo3-tracing-subscriber = { workspace = true, features = ["layer-otel-otlp-file", "layer-otel-otlp", "stubs"], default-features = false }
 
 [lints.clippy]
 too_many_arguments = "allow"

crates/python/qcs_sdk/_tracing_subscriber/layers/__init__.py

@@ -15,3 +15,4 @@
 
 __doc__ = layers.__doc__
 __all__ = getattr(layers, "__all__", [])
+

crates/python/qcs_sdk/_tracing_subscriber/layers/__init__.pyi

@@ -13,18 +13,18 @@
 from __future__ import annotations
 from typing import TYPE_CHECKING
 
-from . import file as file
+from . import file as file 
 from . import otel_otlp_file as otel_otlp_file
 from . import otel_otlp as otel_otlp
 
 if TYPE_CHECKING:
-    from typing import Union
+  from typing import Union
 
-    Config = Union[
-        file.Config,
-        otel_otlp_file.Config,
-        otel_otlp.Config,
-    ]
-    """
+  Config = Union[
+    file.Config,
+    otel_otlp_file.Config, 
+    otel_otlp.Config,
+      ]
+  """
   One of the supported layer configurations that may be set on the subscriber configuration.
   """

crates/python/qcs_sdk/_tracing_subscriber/layers/file/__init__.py

@@ -15,3 +15,5 @@
 
 __doc__ = file.__doc__
 __all__ = getattr(file, "__all__", [])
+
+

crates/python/qcs_sdk/_tracing_subscriber/layers/file/__init__.pyi

@@ -39,3 +39,4 @@ class Config:
         :param json: Whether or not to format the output as JSON. Defaults to `True`.
         """
         ...
+

crates/python/qcs_sdk/_tracing_subscriber/layers/otel_otlp/__init__.py

@@ -15,3 +15,4 @@
 
 __doc__ = otel_otlp.__doc__
 __all__ = getattr(otel_otlp, "__all__", [])
+

crates/python/qcs_sdk/_tracing_subscriber/layers/otel_otlp/__init__.pyi

@@ -47,6 +47,8 @@ class Resource:
         schema_url: Optional[str] = None,
     ) -> "Resource": ...
 
+
+
 @final
 class Config:
     """
@@ -96,14 +98,14 @@ class Config:
         ...
 
 if TYPE_CHECKING:
-    from typing import List, Union
+    from typing import List, Union 
 
     ResourceValueArray = Union[List[bool], List[int], List[float], List[str]]
     """
     An array of `ResourceValue`s. This array is homogenous, so all values must be of the same type.
     """
 
-    ResourceValue = Union[bool, int, float, str, ResourceValueArray]
+    ResourceValue= Union[bool, int, float, str, ResourceValueArray]
     """
     A value that can be added to a `Resource`.
     """

crates/python/qcs_sdk/_tracing_subscriber/layers/otel_otlp_file/__init__.py

@@ -15,3 +15,4 @@
 
 __doc__ = otel_otlp_file.__doc__
 __all__ = getattr(otel_otlp_file, "__all__", [])
+

crates/python/qcs_sdk/_tracing_subscriber/layers/otel_otlp_file/__init__.pyi

@@ -32,3 +32,4 @@ class Config:
             and then `RUST_LOG` environment variable. If all of these values are empty, no spans will be exported.
         """
         ...
+

crates/python/qcs_sdk/_tracing_subscriber/subscriber/__init__.py

@@ -15,3 +15,4 @@
 
 __doc__ = subscriber.__doc__
 __all__ = getattr(subscriber, "__all__", [])
+

crates/python/qcs_sdk/_tracing_subscriber/subscriber/__init__.pyi

@@ -22,3 +22,4 @@ class Config:
     """
 
     def __new__(cls, *, layer: layers.Config) -> "Config": ...
+

deny.toml

@@ -64,11 +64,8 @@ feature-depth = 1
 # https://embarkstudios.github.io/cargo-deny/checks/advisories/cfg.html
 [advisories]
 ignore = [
-    { id = "RUSTSEC-2023-0052", reason = "Introduced by transitive dependency `webpki`. `hyper-proxy`, then `qcs-api-client-rust` need to update in order to remove" },
-    # { id = "RUSTSEC-2024-0320", reason = "yaml-rust is an unmaintained crate introduced by dev-dependency insta" },
-    { id = "RUSTSEC-2024-0336", reason = "introduced by hyper, a transitive dependency of qcs-api-client-grpc" },
-    { id = "RUSTSEC-2023-0055", reason = "introduced by lexical, a transitive dependency of quil-rs" },
     { id = "RUSTSEC-2021-0145", reason = "introduced by atty, a transitive dependency of multiple dependencies, with no upgrade path" },
+    { id = "RUSTSEC-2024-0375", reason = "introduced by atty, a transitive dependency of multiple dependencies, with no upgrade path" },
     { id = "RUSTSEC-2024-0006", reason = "introduced by shlex, a transitive dependency of bindgen with no upgrade path" },
     { id = "RUSTSEC-2021-0139", reason = "ansi_term is unmaintained, but used by clap" },
 ]
@@ -174,29 +171,6 @@ deny = [
     #{ crate = "ansi_term@0.11.0", wrappers = ["this-crate-directly-depends-on-ansi_term"] },
 ]
 
-# List of features to allow/deny
-# Each entry the name of a crate and a version range. If version is
-# not specified, all versions will be matched.
-#[[bans.features]]
-#crate = "reqwest"
-# Features to not allow
-#deny = ["json"]
-# Features to allow
-#allow = [
-#    "rustls",
-#    "__rustls",
-#    "__tls",
-#    "hyper-rustls",
-#    "rustls",
-#    "rustls-pemfile",
-#    "rustls-tls-webpki-roots",
-#    "tokio-rustls",
-#    "webpki-roots",
-#]
-# If true, the allowed features must exactly match the enabled feature set. If
-# this is set there is no point setting `deny`
-#exact = true
-
 # Certain crates/versions that will be skipped when doing duplicate detection.
 skip = [
     #"ansi_term@0.11.0",
@@ -212,7 +186,6 @@ skip-tree = [
     { crate = "toml", depth = 20 },
     { crate = "warp", depth = 20 },              # Only used for development
     { crate = "hermit-abi", depth = 20 },        # Only used for development
-    { crate = "hyper-rustls", depth = 20 },      # `hyper-proxy` relies on an older version than `reqwest`
     { crate = "itertools", depth = 20 },         # `quil-rs` and various transitive dependencies depend on different versions
     { crate = "hashbrown", depth = 20 },         # `indexmap` and `cached` depend on different versions
 ]