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Create Mermaid diagram #19

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Nov 12, 2024
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64 changes: 64 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -74,6 +74,70 @@ generateExtension('<directory path>/ndx-events/spec/ndx-events.namespace.yaml');
1. [Example writing TTL pulses and stimulus presentations to an NWB file](examples/write_ttls_events.py).


## Diagram


```mermaid
%%{init: {'theme': 'base', 'themeVariables': {'primaryColor': '#ffffff', "primaryBorderColor': '#144E73', 'lineColor': '#D96F32'}}}%%


classDiagram
direction LR

class TimestampVectorData {
<<VectorData>>

data : NDArray[Shape["*"], Float]
--> unit : str = "seconds"
resolution : float, optional
}

class DurationVectorData {
<<VectorData>>

data : NDArray[Shape["*"], Float]
--> unit : str = "seconds"
resolution : float, optional
}

class CategoricalVectorData {
<<VectorData>>

data : NDArray[Shape["*"], Any]
meanings : MeaningsTable
filter_values : NDArray[Shape["*"], String], optional
}

class MeaningsTable {
<<DynamicTable>>

value : VectorData[NDArray[Shape["*"], Any]]
meaning : VectorData[NDArray[Shape["*"], String]]
}

class EventsTable {
<<DynamicTable>>

timestamp : TimestampVectorData
duration : DurationVectorData, optional
meanings_tables : list[MeaningsTable]
[additional_columns] : list[VectorData], optional
}

class NdxEventsNWBFile {
<<NWBFile>>

events : list[EventsTable]
}

CategoricalVectorData ..> MeaningsTable : object reference
EventsTable "1" *--> "0..*" MeaningsTable : contains
EventsTable "1" *--> "1..*" TimestampVectorData : contains
EventsTable "1" *--> "0..*" DurationVectorData : contains
EventsTable "1" *--> "0..*" CategoricalVectorData : contains
NdxEventsNWBFile "1" *--> "0..*" EventsTable : contains
```

## Developer installation

In a Python 3.8-3.12 environment:
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