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Allow bc_cut to be defined at the sample level snakemake-run #107: Commit 4480512 pushed by agillen
August 29, 2024 16:17 2m 17s config_update
config_update
August 29, 2024 16:17 2m 17s
Merge pull request #76 from rnabioco/master snakemake-run #106: Commit 28bf2ee pushed by agillen
August 28, 2024 22:29 2m 30s config_update
config_update
August 28, 2024 22:29 2m 30s
Limit snakemake version to < 8.0 snakemake-run #105: Pull request #76 opened by agillen
August 28, 2024 22:29 2m 7s master
master
August 28, 2024 22:29 2m 7s
Limit snakemake version to < 8.0 snakemake-run #104: Commit 973c077 pushed by agillen
August 28, 2024 22:25 2m 24s master
master
August 28, 2024 22:25 2m 24s
pages build and deployment pages-build-deployment #40: by agillen
August 28, 2024 22:25 46s
August 28, 2024 22:25 46s
correct paired argument parsing and length retrieval snakemake-run #103: Commit cf31eaa pushed by agillen
August 28, 2024 21:46 2m 16s config_update
config_update
August 28, 2024 21:46 2m 16s
add SAMPLE > CHEMISTRY > DEFAULT config logic and simplify STAR argum… snakemake-run #102: Commit c5b2539 pushed by agillen
August 28, 2024 21:40 2m 13s config_update
config_update
August 28, 2024 21:40 2m 13s
move relaxed alignment parameters for illumina to chemistry.json snakemake-run #101: Commit 2dfdaf0 pushed by agillen
August 28, 2024 21:10 2m 30s config_update
config_update
August 28, 2024 21:10 2m 30s
convert chemistry definitions to yaml, add support for element sequen… snakemake-run #100: Commit 22de723 pushed by agillen
August 28, 2024 20:59 2m 1s config_update
config_update
August 28, 2024 20:59 2m 1s
convert sample-config to YAML-derived dictionary with defaults snakemake-run #99: Commit c07b3d6 pushed by agillen
August 28, 2024 19:50 2m 3s config_update
config_update
August 28, 2024 19:50 2m 3s
Fix strand assignment for R1 and paired alignment rules snakemake-run #98: Commit b131023 pushed by agillen
August 28, 2024 19:41 2m 14s config_update
config_update
August 28, 2024 19:41 2m 14s
Fix strand assignment for R1 and paired alignment rules snakemake-run #97: Commit b131023 pushed by agillen
February 15, 2024 06:29 2m 29s master
master
February 15, 2024 06:29 2m 29s
pages build and deployment pages-build-deployment #39: by agillen
February 15, 2024 06:29 42s
February 15, 2024 06:29 42s
Merge pull request #75 from rnabioco/mass_rename_incl_ultima snakemake-run #96: Commit 1f0356f pushed by agillen
January 30, 2024 19:03 2m 37s master
master
January 30, 2024 19:03 2m 37s
pages build and deployment pages-build-deployment #38: by agillen
January 30, 2024 19:03 49s
January 30, 2024 19:03 49s
Remove LSF-specific args, fix rule naming, add support for Ultima Genomics snakemake-run #95: Pull request #75 opened by agillen
January 30, 2024 18:59 1m 50s mass_rename_incl_ultima
mass_rename_incl_ultima
January 30, 2024 18:59 1m 50s
fix paired chemistry definition issues snakemake-run #94: Commit 854dda2 pushed by agillen
January 30, 2024 18:57 1m 51s mass_rename_incl_ultima
mass_rename_incl_ultima
January 30, 2024 18:57 1m 51s
fix input files for star paired alignments snakemake-run #93: Commit e061239 pushed by agillen
January 30, 2024 18:35 2m 8s mass_rename_incl_ultima
mass_rename_incl_ultima
January 30, 2024 18:35 2m 8s
Update Snakefile snakemake-run #92: Commit 1856ffe pushed by agillen
January 30, 2024 18:32 1m 46s mass_rename_incl_ultima
mass_rename_incl_ultima
January 30, 2024 18:32 1m 46s
fix naming in Snakefile to make less awkward snakemake-run #91: Commit 43289bb pushed by agillen
January 30, 2024 18:21 1m 57s mass_rename_incl_ultima
mass_rename_incl_ultima
January 30, 2024 18:21 1m 57s
fix naming in Snakefile and remove unused variables snakemake-run #90: Commit 3123c56 pushed by agillen
January 30, 2024 18:18 2m 5s mass_rename_incl_ultima
mass_rename_incl_ultima
January 30, 2024 18:18 2m 5s
update config and Snakefile to reflect new naming snakemake-run #89: Commit 5b3b9c1 pushed by agillen
January 30, 2024 18:07 1m 45s mass_rename_incl_ultima
mass_rename_incl_ultima
January 30, 2024 18:07 1m 45s
remove LSF-specific memory directives from params snakemake-run #88: Commit 252bcc1 pushed by agillen
November 14, 2023 08:34 2m 18s mass_rename_incl_ultima
mass_rename_incl_ultima
November 14, 2023 08:34 2m 18s
fix errant multiline param definition snakemake-run #87: Commit 7bca704 pushed by agillen
November 14, 2023 08:16 2m 12s mass_rename_incl_ultima
mass_rename_incl_ultima
November 14, 2023 08:16 2m 12s
fix incorrect rename snakemake-run #86: Commit 1b1c268 pushed by agillen
October 5, 2023 16:54 1m 39s mass_rename_incl_ultima
mass_rename_incl_ultima
October 5, 2023 16:54 1m 39s