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download_ena fails with multiple r1 and r2 fqs per sample #69
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I am encountering this issue. Does it prevent the rest of the rules from executing properly, or can I ignore the download_ena errors? |
i don't have the bandwidth to fix this issue at this time. Perhaps @agillen or @raysinensis can help out. |
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If there are multiple r1 and r2 input fastqs per sample the download_ena rule will be called, even if they exist. This will attempt to generate a single r1 and r2 fastq by downloading the
sample
wildcard from ENA, which will fail.e.g.
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