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Merge branch 'main' of https://github.com/ropensci/occCite
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hannahlowens committed Oct 16, 2024
2 parents dbfd770 + 680836e commit b217a83
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6 changes: 3 additions & 3 deletions .github/workflows/R-CMD-check.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -33,13 +33,13 @@ jobs:
RSPM: ${{ matrix.config.rspm }}

steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}

- uses: r-lib/actions/setup-pandoc@v1
- uses: r-lib/actions/setup-pandoc@v2

- name: Query dependencies
run: |
Expand All @@ -50,7 +50,7 @@ jobs:

- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v2
uses: actions/cache@v4
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
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41 changes: 35 additions & 6 deletions .github/workflows/test-coverage.yaml
Original file line number Diff line number Diff line change
@@ -1,12 +1,14 @@
# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]

name: test-coverage
name: test-coverage.yaml

permissions: read-all

jobs:
test-coverage:
Expand All @@ -15,16 +17,43 @@ jobs:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v1
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: covr
extra-packages: any::covr, any::xml2
needs: coverage

- name: Test coverage
run: covr::codecov()
run: |
cov <- covr::package_coverage(
quiet = FALSE,
clean = FALSE)
covr::to_cobertura(cov)
shell: Rscript {0}

- uses: codecov/codecov-action@v4
with:
fail_ci_if_error: ${{ github.event_name != 'pull_request' && true || false }}
file: ./cobertura.xml
plugin: noop
disable_search: true
token: ${{ secrets.CODECOV_TOKEN }}

- name: Show testthat output
if: always()
run: |
## --------------------------------------------------------------------
find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload test results
if: failure()
uses: actions/upload-artifact@v4
with:
name: coverage-test-failures
path: ${{ runner.temp }}/package

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