feat: BLAST Dockerfile and GitHub CI pipeline #1
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| name: Build BLAST container push to quay.io | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - 'v*' | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout Source | |
| uses: actions/checkout@v4 | |
| - name: Set up QEMU | |
| uses: docker/setup-qemu-action@v3 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Login to Quay.io | |
| uses: docker/login-action@v3 | |
| with: | |
| registry: quay.io | |
| username: rosalindfranklininstitute+github_blast | |
| password: ${{ secrets.QUAYIO_TOKEN }} | |
| - name: Set BLAST version | |
| run: | | |
| echo BLAST_VERSION=$([ "$GITHUB_REF_TYPE" = "tag" ] && echo $GITHUB_REF_NAME || curl https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/VERSION 2>/dev/null) >> $GITHUB_ENV | |
| - name: Docker metadata | |
| id: meta | |
| uses: docker/metadata-action@v5 | |
| with: | |
| images: | | |
| quay.io/rosalindfranklininstitute/blast | |
| tags: | | |
| type=raw,value=latest,enable=${{ github.ref == format('refs/heads/{0}', 'main') }} | |
| type=semver,pattern={{version}} | |
| type=semver,pattern={{major}}.{{minor}} | |
| labels: | | |
| blast-version=${{ env.BLAST_VERSION }} | |
| - name: Build and push image | |
| uses: docker/build-push-action@v6 | |
| with: | |
| context: . | |
| platforms: linux/amd64,linux/arm64 | |
| build-args: | | |
| BLAST_VERSION=${{ env.BLAST_VERSION }} | |
| push: ${{ github.event_name != 'pull_request' }} | |
| tags: ${{ steps.meta.outputs.tags }} | |
| labels: ${{ steps.meta.outputs.labels }} |