Replace doctest runner by pytest in ci #36981

tobiasdiez · 2023-12-29T12:46:11Z

Replace sage's custom doctest runner by pytest in ci.

TODO:

Require pytest >= 8.1 (because consider_namespace_packages was added there)
Document problems like Cannot create consistent method resolution order (MRO) when using filtered categories #39154

📝 Checklist

The title is concise, informative, and self-explanatory.
The description explains in detail what this PR is about.
I have linked a relevant issue or discussion.
I have created tests covering the changes.
I have updated the documentation accordingly.

⌛ Dependencies

… of errors and failures

…y DoctestRunner

github-actions · 2024-02-25T18:36:29Z

Documentation preview for this PR (built with commit 366925f; changes) is ready! 🎉
This preview will update shortly after each push to this PR.

Pytest collects all top-level methods with `test_` prefix as tests. Most of these methods are actually for tests, but are not (yet) proper pytests. So we rename them so that pytests ignores them. https://docs.pytest.org/en/stable/explanation/goodpractices.html#test-discovery

…octest

Due to sagemath#39144

tobiasdiez · 2024-12-16T11:46:15Z

Random failures in combinat:

src/sage/combinat/sf/sf.py ...........................F...
Fatal Python error: Aborted

Current thread 0x0000000207324f40 (most recent call first):
  File "/Users/runner/work/sage/sage/src/sage/combinat/q_analogues.py", line 386 in <genexpr>
  File "/Users/runner/work/sage/sage/src/sage/combinat/q_analogues.py", line 386 in q_binomial
  File "/Users/runner/work/sage/sage/src/sage/combinat/sf/homogeneous.py", line 310 in <genexpr>
  File "/Users/runner/work/sage/sage/src/sage/combinat/sf/homogeneous.py", line 310 in <lambda>
  File "/Users/runner/work/sage/sage/src/sage/categories/modules_with_basis.py", line 1277 in _apply_module_morphism
  File "/Users/runner/work/sage/sage/src/sage/combinat/sf/homogeneous.py", line 312 in principal_specialization
  File "<doctest sage.combinat.sf.sfa.SymmetricFunctionAlgebra_generic.Element.principal_specialization[32]>", line 1 in <listcomp>
  File "<doctest sage.combinat.sf.sfa.SymmetricFunctionAlgebra_generic.Element.principal_specialization[32]>", line 1 in <module>
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/doctest.py", line 1355 in __run
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/doctest.py", line 1519 in run
  File "/Users/runner/work/sage/sage/src/conftest.py", line 273 in doctest_run
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/doctest.py", line 1880 in run
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/doctest.py", line 301 in runtest
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/runner.py", line 174 in pytest_runtest_call
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_callers.py", line 103 in _multicall
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_manager.py", line 120 in _hookexec
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_hooks.py", line 513 in __call__
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/runner.py", line 242 in <lambda>
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/runner.py", line 341 in from_call
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/runner.py", line 241 in call_and_report
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/runner.py", line 132 in runtestprotocol
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 285 in run_subprocess
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 115 in run_subprocess
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/process.py", line 108 in run
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/process.py", line 314 in _bootstrap
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/popen_fork.py", line 71 in _launch
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/popen_fork.py", line 19 in __init__
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/context.py", line 281 in _Popen
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/process.py", line 121 in start
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 123 in run_in_subprocess
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 47 in forked_subprocess
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 314 in run_in_subprocess
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 466 in pytest_runtest_protocol
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_callers.py", line 103 in _multicall
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_manager.py", line 120 in _hookexec
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_hooks.py", line 513 in __call__
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/main.py", line 362 in pytest_runtestloop
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_callers.py", line 103 in _multicall
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_manager.py", line 120 in _hookexec
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_hooks.py", line 513 in __call__
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/main.py", line 337 in _main
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/main.py", line 283 in wrap_session
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/main.py", line 330 in pytest_cmdline_main
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_callers.py", line 103 in _multicall
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_manager.py", line 120 in _hookexec
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_hooks.py", line 513 in __call__
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/config/__init__.py", line 175 in main
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/config/__init__.py", line 201 in console_main
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest/__main__.py", line 9 in <module>
  File "<frozen runpy>", line 88 in _run_code
  File "<frozen runpy>", line 198 in _run_module_as_main

Extension modules: sage.libs.gmp.pylong, sage.misc.randstate, sage.cpython.string, sage.misc.lazy_attribute, sage.misc.function_mangling, sage.cpython.dict_del_by_value, sage.misc.weak_dict, sage.misc.instancedoc, sage.misc.cachefunc, sage.misc.persist, sage.misc.lazy_import, sage.structure.sage_object, sage.misc.nested_class, sage.misc.classcall_metaclass, sage.misc.inherit_comparison, sage.cpython.getattr, sage.misc.c3_controlled, sage.misc.constant_function, sage.misc.fast_methods, sage.cpython.builtin_types, sage.structure.richcmp, sage.categories.category_cy_helper, sage.structure.category_object, cysignals.signals, sage.structure.coerce_dict, sage.categories.category_singleton, sage.categories.functor, sage.categories.morphism, sage.sets.pythonclass, sage.arith.power, sage.categories.map, sage.structure.debug_options, sage.misc.lazy_string, gmpy2.gmpy2, sage.categories.action, sage.structure.coerce, sage.structure.coerce_maps, sage.cpython.type, sage.structure.parent, sage.structure.element, sage.cpython.atexit, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, PIL._imaging, kiwisolver._cext, sage.structure.parent_old, sage.structure.parent_base, sage.structure.parent_gens, sage.structure.mutability, sage.structure.element_wrapper, sage.misc.misc_c, sage.cpython.debug, cysignals.alarm, sage.misc.sage_timeit_class, sage.misc.session, sage.misc.fpickle, sage.misc.reset, sage.libs.ntl.error, sage.rings.fast_arith, sage.categories.coercion_methods, sage.rings.ring, sage.rings.number_field.number_field_base, sage.rings.abc, sage.rings.number_field.number_field_element_base, sage.rings.integer_ring, sage.misc.allocator, cypari2.stack, cypari2.string_utils, cypari2.convert, cypari2.closure, cypari2.gen, cypari2.handle_error, cypari2.pari_instance, sage.rings.rational, sage.arith.rational_reconstruction, sage.rings.integer, sage.libs.ntl.convert, sage.libs.ntl.ntl_ZZ, sage.libs.ntl.ntl_ZZ_pContext, sage.libs.ntl.ntl_ZZ_p, sage.libs.ntl.ntl_ZZX, sage.libs.ntl.ntl_ZZ_pX, sage.libs.ntl.ntl_ZZ_pEContext, sage.libs.ntl.ntl_ZZ_pE, sage.libs.ntl.ntl_ZZ_pEX, sage.libs.ntl.ntl_lzz_pContext, sage.rings.finite_rings.element_base, sage.ext.memory, sage.arith.functions, sage.rings.finite_rings.integer_mod, sage.libs.ntl.ntl_lzz_p, sage.libs.ntl.ntl_lzz_pX, sage.libs.ntl.ntl_mat_ZZ, sage.libs.ntl.ntl_GF2, sage.libs.ntl.ntl_GF2X, sage.libs.ntl.ntl_GF2EContext, sage.libs.ntl.ntl_GF2E, sage.libs.ntl.ntl_GF2EX, sage.libs.ntl.ntl_mat_GF2E, sage.libs.ntl.ntl_mat_GF2, sage.libs.symmetrica.symmetrica, memory_allocator.memory_allocator, sage.data_structures.bitset_base, sage.data_structures.bitset, cysignals.pselect, cysignals.pysignals, sage.interfaces.process, sage.interfaces.sagespawn, sage.structure.factory, sage.rings.polynomial.commutative_polynomial, sage.misc.binary_tree, sage.rings.polynomial.polynomial_compiled, sage.rings.polynomial.polydict, sage.misc.derivative, sage.rings.padics.pow_computer, sage.rings.padics.local_generic_element, sage.arith.srange, sage.rings.padics.padic_generic_element, sage.rings.morphism, sage.rings.padics.common_conversion, sage.libs.pari.convert_gmp, sage.rings.finite_rings.finite_field_base, sage.rings.padics.padic_capped_relative_element, sage.rings.padics.padic_capped_absolute_element, sage.rings.padics.padic_floating_point_element, sage.rings.padics.padic_fixed_mod_element, sage.rings.polynomial.multi_polynomial, sage.cpython.wrapperdescr, sage.rings.fraction_field_element, sage.rings.real_double_element_gsl, sage.rings.real_double, sage.rings.function_field.element, sage.rings.function_field.element_rational, sage.rings.power_series_ring_element, sage.rings.polynomial.multi_polynomial_ring_base, sage.rings.polynomial.polynomial_element, sage.rings.finite_rings.element_pari_ffelt, sage.rings.finite_rings.element_givaro, sage.libs.mpmath.utils, sage.libs.pari.convert_sage_real_mpfr, sage.rings.real_mpfr, sage.rings.complex_conversion, sage.libs.pari.convert_sage_complex_double, sage.misc.parser, sage.rings.complex_double, sage.rings.complex_mpfr, sage.rings.complex_interval, sage.rings.convert.mpfi, sage.rings.real_mpfi, sage.rings.real_lazy, sage.groups.group, sage.matrix.args, sage.structure.coerce_actions, sage.modules.free_module_element, sage.modules.module, sage.matrix.constructor, sage.rings.number_field.number_field_morphisms, sage.rings.polynomial.evaluation_ntl, sage.rings.number_field.number_field_element, sage.rings.real_arb, sage.rings.polynomial.polynomial_complex_arb, sage.rings.complex_arb, sage.rings.number_field.number_field_element_quadratic, sage.rings.finite_rings.residue_field, sage.rings.padics.padic_printing, sage.rings.padics.padic_ext_element, sage.rings.padics.pow_computer_ext, sage.rings.padics.padic_ZZ_pX_element, sage.rings.padics.padic_ZZ_pX_FM_element, sage.rings.padics.padic_ZZ_pX_CR_element, sage.rings.padics.padic_ZZ_pX_CA_element, sage.libs.flint.fmpz_poly_sage, sage.rings.polynomial.evaluation_flint, sage.rings.polynomial.polynomial_integer_dense_flint, sage.rings.padics.pow_computer_flint, sage.rings.padics.qadic_flint_CR, sage.rings.padics.qadic_flint_CA, sage.rings.padics.qadic_flint_FP, sage.rings.padics.qadic_flint_FM, sage.rings.padics.pow_computer_relative, sage.rings.padics.relative_ramified_FP, sage.rings.padics.relative_ramified_FM, sage.rings.padics.relative_ramified_CR, sage.rings.padics.relative_ramified_CA, sage.sets.family, sage.rings.semirings.tropical_semiring, sage.rings.polynomial.laurent_polynomial, sage.structure.list_clone, sage.rings.polynomial.cyclotomic, sage.libs.flint.fmpq_poly_sage, sage.rings.polynomial.polynomial_rational_flint, sage.rings.power_series_poly, sage.rings.power_series_mpoly, sage.rings.laurent_series_ring_element, sage.rings.finite_rings.element_ntl_gf2e, sage.libs.singular.ring, sage.libs.singular.singular, sage.libs.singular.polynomial, sage.rings.noncommutative_ideals, sage.rings.polynomial.plural, sage.rings.polynomial.multi_polynomial_ideal_libsingular, sage.libs.singular.option, sage.libs.singular.function, sage.rings.polynomial.multi_polynomial_libsingular, sage.rings.complex_mpc, sage.rings.tate_algebra_element, sage.rings.puiseux_series_ring_element, sage.rings.bernmm, sage.rings.bernoulli_mod_p, sage.symbolic.function, sage.symbolic.expression, sage.symbolic.ring, sage.combinat.combinat_cython, sage.monoids.free_abelian_monoid_element, sage.quadratic_forms.quadratic_form__evaluate, sage.quadratic_forms.count_local_2, sage.algebras.quatalg.quaternion_algebra_element, sage.matrix.matrix0, sage.matrix.matrix1, sage.matrix.matrix2, sage.matrix.matrix_dense, sage.modules.vector_integer_dense, sage.arith.multi_modular, sage.modules.vector_modn_dense, sage.matrix.matrix_modn_dense_float, sage.matrix.matrix_modn_dense_double, sage.modules.vector_mod2_dense, sage.matrix.matrix_mod2_dense, sage.libs.pari.convert_flint, sage.libs.linbox.linbox_flint_interface, sage.libs.pari.convert_sage, sage.libs.pari.convert_sage_matrix, sage.matrix.matrix_integer_dense, sage.modules.vector_rational_dense, sage.matrix.matrix_rational_dense, sage.algebras.quatalg.quaternion_algebra_cython, sage.misc.search, sage.modular.modsym.p1list, sage.data_structures.blas_dict, sage.modules.with_basis.indexed_element, sage.misc.lazy_list, sage.misc.callable_dict, sage.combinat.words.word_datatypes, sage.combinat.words.word_char, sage.algebras.finite_dimensional_algebras.finite_dimensional_algebra_element, sage.algebras.clifford_algebra_element, sage.modular.arithgroup.arithgroup_element, sage.libs.gap.util, sage.libs.gap.libgap, sage.groups.perm_gps.permgroup_element, sage.sets.recursively_enumerated_set, sage.combinat.integer_lists.base, sage.combinat.integer_lists.invlex, sage.combinat.permutation_cython, sage.libs.gap.element, sage.groups.libgap_wrapper, sage.groups.matrix_gps.group_element_gap, sage.groups.matrix_gps.group_element, sage.modular.arithgroup.congroup, sage.modular.arithgroup.farey_symbol, sage.rings.polynomial.ore_polynomial_element, sage.rings.factorint, sage.graphs.base.c_graph, sage.graphs.base.graph_backends, sage.graphs.base.dense_graph, sage.graphs.base.static_sparse_backend, sage.graphs.base.static_sparse_graph, sage.graphs.generic_graph_pyx, sage.graphs.views, sage.graphs.distances_all_pairs, sage.graphs.base.boost_graph, sage.graphs.line_graph, sage.groups.perm_gps.partn_ref.data_structures, sage.sets.disjoint_set, sage.graphs.connectivity, sage.graphs.base.static_dense_graph, sage.graphs.path_enumeration, sage.graphs.graph_decompositions.slice_decomposition, sage.graphs.traversals, sage.graphs.independent_sets, sage.graphs.weakly_chordal, 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sage.rings.number_field.totallyreal_data, sage.libs.pari.misc, sage.rings.number_field.totallyreal, sage.modular.modsym.apply, sage.matrix.misc_flint, sage.matrix.matrix_cyclo_dense, sage.modular.modsym.heilbronn, sage.modular.modform.eis_series_cython, sage.sat.solvers.satsolver, sage.schemes.hyperelliptic_curves.hypellfrob, ppl.congruence, ppl.constraint, ppl.linear_algebra, ppl.generator, ppl.mip_problem, ppl.polyhedron, ppl.bit_arrays, sage.rings.sum_of_squares, sage.graphs.strongly_regular_db, sage.graphs.generators.distance_regular, sage.groups.semimonomial_transformations.semimonomial_transformation, _brotli, zstandard.backend_c, sage.calculus.transforms.fft, sage.libs.gsl.array, sage.calculus.transforms.dwt, sage.calculus.riemann, sage.calculus.interpolators, sage.plot.complex_plot, sage.plot.plot3d.implicit_surface, sage.combinat.crystals.letters, sage.combinat.crystals.spins, sage.combinat.crystals.tensor_product_element, sage.combinat.rigged_configurations.rigged_partition, sage.combinat.crystals.pbw_datum, sage.combinat.matrices.dancing_links, sage.combinat.degree_sequences, sage.combinat.subword_complex_c, sage.numerical.mip, sage.lfunctions.zero_sums, sage.data_structures.list_of_pairs, sage.geometry.polyhedron.combinatorial_polyhedron.list_of_faces, sage.geometry.polyhedron.combinatorial_polyhedron.face_list_data_structure, sage.geometry.polyhedron.combinatorial_polyhedron.conversions, sage.geometry.polyhedron.combinatorial_polyhedron.polyhedron_face_lattice, sage.geometry.polyhedron.combinatorial_polyhedron.face_iterator, sage.geometry.polyhedron.combinatorial_polyhedron.combinatorial_face, sage.geometry.polyhedron.combinatorial_polyhedron.base, sage.dynamics.complex_dynamics.mandel_julia_helper, sage.numerical.backends.generic_sdp_backend, sage.numerical.linear_functions, sage.numerical.sdp, sage.modules.vector_numpy_dense, sage.modules.vector_double_dense, sage.modules.vector_real_double_dense, sage.stats.time_series, sage.stats.intlist, sage.matroids.basis_exchange_matroid, sage.matroids.circuits_matroid, sage.matroids.flats_matroid, sage.matroids.circuit_closures_matroid, sage.matroids.basis_matroid, sage.matroids.linear_matroid, sage.matroids.graphic_matroid, sage.libs.flint.flint_sage, sage.matrix.matrix_gap, cython.cimports.libc.math, scipy._lib._ccallback_c, lrcalc, sage.rings.ring_extension_conversion, sage.rings.ring_extension_morphism, sage.rings.ring_extension_element, sage.rings.ring_extension, sage.rings.function_field.element_polymod, sage.coding.ag_code_decoders, sage.coding.kasami_codes, sage.rings.polynomial.polynomial_gf2x, sage.rings.finite_rings.hom_finite_field, sage.libs.flint.ulong_extras_sage, sage.matrix.matrix_gf2e_dense, sage.combinat.designs.designs_pyx, sage.combinat.designs.gen_quadrangles_with_spread, sage.combinat.posets.hasse_cython_flint, fpylll.gmp.pylong, fpylll.numpy, fpylll.io, fpylll.fplll.gso, fpylll.util, fpylll.fplll.integer_matrix, fpylll.fplll.wrapper, fpylll.fplll.lll, fpylll.fplll.enumeration, fpylll.fplll.pruner, fpylll.config, fpylll.fplll.bkz_param, fpylll.fplll.bkz, fpylll.fplll.svpcvp, sage.stats.distributions.discrete_gaussian_integer, Cython.Utils, Cython.Plex.Actions, Cython.Plex.Transitions, Cython.Plex.Machines, Cython.Plex.DFA, Cython.Plex.Scanners, Cython.Compiler.Scanning, Cython.StringIOTree, Cython.Compiler.Code, Cython.Tempita._tempita, Cython.Compiler.Visitor, Cython.Compiler.Parsing, Cython.Compiler.FlowControl, _var_folders_0w_4z5l9vds32nbkz7l22n8j6s80000gn_T_tmpye96avd6_tmp_44ysg4l0_pyx_0, sage.numerical.backends.cvxopt_backend, sage.libs.braiding, sage.libs.homfly, primecountpy.primecount, scipy.special._ufuncs_cxx, scipy.special._ufuncs, scipy.special._specfun, scipy.special._comb, scipy.linalg._fblas, scipy.linalg._flapack, scipy.linalg.cython_lapack, scipy.linalg._cythonized_array_utils, scipy.linalg._solve_toeplitz, scipy.linalg._decomp_lu_cython, scipy.linalg._matfuncs_sqrtm_triu, scipy.linalg.cython_blas, scipy.linalg._matfuncs_expm, scipy.linalg._decomp_update, scipy.sparse._sparsetools, _csparsetools, scipy.sparse._csparsetools, scipy.sparse.linalg._dsolve._superlu, scipy.sparse.linalg._eigen.arpack._arpack, scipy.sparse.linalg._propack._spropack, scipy.sparse.linalg._propack._dpropack, scipy.sparse.linalg._propack._cpropack, scipy.sparse.linalg._propack._zpropack, scipy.sparse.csgraph._tools, scipy.sparse.csgraph._shortest_path, scipy.sparse.csgraph._traversal, scipy.sparse.csgraph._min_spanning_tree, scipy.sparse.csgraph._flow, scipy.sparse.csgraph._matching, scipy.sparse.csgraph._reordering, scipy.special._ellip_harm_2, sage.rings.polynomial.polynomial_real_mpfr_dense, sage.geometry.integral_points_integer_dense, scipy.integrate._odepack, scipy.integrate._quadpack, scipy.integrate._vode, scipy.integrate._dop, scipy.integrate._lsoda, scipy.optimize._group_columns, scipy._lib.messagestream, scipy.optimize._trlib._trlib, scipy.optimize._lbfgsb, _moduleTNC, scipy.optimize._moduleTNC, scipy.optimize._cobyla, scipy.optimize._slsqp, scipy.optimize._minpack, scipy.optimize._lsq.givens_elimination, scipy.optimize._zeros, scipy.optimize._highs.cython.src._highs_wrapper, scipy.optimize._highs._highs_wrapper, scipy.optimize._highs.cython.src._highs_constants, scipy.optimize._highs._highs_constants, scipy.linalg._interpolative, scipy.optimize._bglu_dense, scipy.optimize._lsap, scipy.spatial._ckdtree, scipy.spatial._qhull, scipy.spatial._voronoi, scipy.spatial._distance_wrap, scipy.spatial._hausdorff, scipy.spatial.transform._rotation, scipy.optimize._direct, sage.matroids.union_matroid, sage.matroids.extension, scipy.interpolate._fitpack, scipy.interpolate._dfitpack, scipy.interpolate._bspl, scipy.interpolate._ppoly, scipy.interpolate.interpnd, scipy.interpolate._rbfinterp_pythran, scipy.interpolate._rgi_cython, markupsafe._speedups, sage.modular.hypergeometric_misc, sage.modular.modform.l_series_gross_zagier_coeffs, sage.modular.modsym.manin_symbol, sage.modular.pollack_stevens.dist, sage.modules.vector_complex_double_dense, sage.numerical.linear_tensor_element, sage.data_structures.bounded_integer_sequences, sage.quivers.paths, sage.quivers.algebra_elements, zmq.backend.cython._zmq, tornado.speedups, psutil._psutil_osx, psutil._psutil_posix, sage.rings.polynomial.refine_root, sage.rings.polynomial.laurent_polynomial_mpair, sage.rings.polynomial.polynomial_integer_dense_ntl, sage.rings.polynomial.weil.weil_polynomials, sage.numerical.gauss_legendre, sage.schemes.toric.divisor_class, sage.stats.hmm.util, sage.stats.hmm.hmm, sage.stats.hmm.distributions, sage.stats.hmm.chmm, sage.structure.list_clone_demo, sage.rings.polynomial.polynomial_ring_homomorphism (total: 591)
src/sage/combinat/sf/sfa.py ..................................................................................F.............................FF.
src/sage/combinat/sf/symplectic.py ....
src/sage/combinat/sf/witt.py .............
src/sage/combinat/shard_order.py .......
src/sage/combinat/shifted_primed_tableau.py .............................................................................
src/sage/combinat/shuffle.py ............................
src/sage/combinat/sidon_sets.py .
src/sage/combinat/similarity_class_type.py .................................................
src/sage/combinat/sine_gordon.py ...............
src/sage/combinat/six_vertex_model.py .................
src/sage/combinat/skew_partition.py ................................................................
src/sage/combinat/skew_tableau.py ...................................................................................................
Fatal Python error: Aborted

Current thread 0x0000000207324f40 (most recent call first):
  File "/Users/runner/work/sage/sage/src/sage/combinat/sloane_functions.py", line 393 in _eval
  File "<doctest sage.combinat.sloane_functions.A000001._eval[2]>", line 1 in <module>
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/doctest.py", line 1355 in __run
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/doctest.py", line 1519 in run
  File "/Users/runner/work/sage/sage/src/conftest.py", line 273 in doctest_run
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/doctest.py", line 1880 in run
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/doctest.py", line 301 in runtest
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/runner.py", line 174 in pytest_runtest_call
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_callers.py", line 103 in _multicall
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_manager.py", line 120 in _hookexec
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_hooks.py", line 513 in __call__
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/runner.py", line 242 in <lambda>
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/runner.py", line 341 in from_call
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/runner.py", line 241 in call_and_report
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/runner.py", line 132 in runtestprotocol
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 285 in run_subprocess
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 115 in run_subprocess
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/process.py", line 108 in run
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/process.py", line 314 in _bootstrap
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/popen_fork.py", line 71 in _launch
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/popen_fork.py", line 19 in __init__
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/context.py", line 281 in _Popen
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/multiprocessing/process.py", line 121 in start
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 123 in run_in_subprocess
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 47 in forked_subprocess
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 314 in run_in_subprocess
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest_isolate/plugin.py", line 466 in pytest_runtest_protocol
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_callers.py", line 103 in _multicall
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_manager.py", line 120 in _hookexec
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_hooks.py", line 513 in __call__
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/main.py", line 362 in pytest_runtestloop
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_callers.py", line 103 in _multicall
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_manager.py", line 120 in _hookexec
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_hooks.py", line 513 in __call__
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/main.py", line 337 in _main
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/main.py", line 283 in wrap_session
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/main.py", line 330 in pytest_cmdline_main
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_callers.py", line 103 in _multicall
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_manager.py", line 120 in _hookexec
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pluggy/_hooks.py", line 513 in __call__
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/config/__init__.py", line 175 in main
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/_pytest/config/__init__.py", line 201 in console_main
  File "/Users/runner/miniconda3/envs/sage/lib/python3.11/site-packages/pytest/__main__.py", line 9 in <module>
  File "<frozen runpy>", line 88 in _run_code
  File "<frozen runpy>", line 198 in _run_module_as_main

Extension modules: sage.libs.gmp.pylong, sage.misc.randstate, sage.cpython.string, sage.misc.lazy_attribute, sage.misc.function_mangling, sage.cpython.dict_del_by_value, sage.misc.weak_dict, sage.misc.instancedoc, sage.misc.cachefunc, sage.misc.persist, sage.misc.lazy_import, sage.structure.sage_object, sage.misc.nested_class, sage.misc.classcall_metaclass, sage.misc.inherit_comparison, sage.cpython.getattr, sage.misc.c3_controlled, sage.misc.constant_function, sage.misc.fast_methods, sage.cpython.builtin_types, sage.structure.richcmp, sage.categories.category_cy_helper, sage.structure.category_object, cysignals.signals, sage.structure.coerce_dict, sage.categories.category_singleton, sage.categories.functor, sage.categories.morphism, sage.sets.pythonclass, sage.arith.power, sage.categories.map, sage.structure.debug_options, sage.misc.lazy_string, gmpy2.gmpy2, sage.categories.action, sage.structure.coerce, sage.structure.coerce_maps, sage.cpython.type, sage.structure.parent, sage.structure.element, sage.cpython.atexit, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, PIL._imaging, kiwisolver._cext, sage.structure.parent_old, sage.structure.parent_base, sage.structure.parent_gens, sage.structure.mutability, sage.structure.element_wrapper, sage.misc.misc_c, sage.cpython.debug, cysignals.alarm, sage.misc.sage_timeit_class, sage.misc.session, sage.misc.fpickle, sage.misc.reset, sage.libs.ntl.error, sage.rings.fast_arith, sage.categories.coercion_methods, sage.rings.ring, sage.rings.number_field.number_field_base, sage.rings.abc, sage.rings.number_field.number_field_element_base, sage.rings.integer_ring, sage.misc.allocator, cypari2.stack, cypari2.string_utils, cypari2.convert, cypari2.closure, cypari2.gen, cypari2.handle_error, cypari2.pari_instance, sage.rings.rational, sage.arith.rational_reconstruction, sage.rings.integer, sage.libs.ntl.convert, sage.libs.ntl.ntl_ZZ, sage.libs.ntl.ntl_ZZ_pContext, sage.libs.ntl.ntl_ZZ_p, sage.libs.ntl.ntl_ZZX, sage.libs.ntl.ntl_ZZ_pX, sage.libs.ntl.ntl_ZZ_pEContext, sage.libs.ntl.ntl_ZZ_pE, sage.libs.ntl.ntl_ZZ_pEX, sage.libs.ntl.ntl_lzz_pContext, sage.rings.finite_rings.element_base, sage.ext.memory, sage.arith.functions, sage.rings.finite_rings.integer_mod, sage.libs.ntl.ntl_lzz_p, sage.libs.ntl.ntl_lzz_pX, sage.libs.ntl.ntl_mat_ZZ, sage.libs.ntl.ntl_GF2, sage.libs.ntl.ntl_GF2X, sage.libs.ntl.ntl_GF2EContext, sage.libs.ntl.ntl_GF2E, sage.libs.ntl.ntl_GF2EX, sage.libs.ntl.ntl_mat_GF2E, sage.libs.ntl.ntl_mat_GF2, sage.libs.symmetrica.symmetrica, memory_allocator.memory_allocator, sage.data_structures.bitset_base, sage.data_structures.bitset, cysignals.pselect, cysignals.pysignals, sage.interfaces.process, sage.interfaces.sagespawn, sage.structure.factory, sage.rings.polynomial.commutative_polynomial, sage.misc.binary_tree, sage.rings.polynomial.polynomial_compiled, sage.rings.polynomial.polydict, sage.misc.derivative, sage.rings.padics.pow_computer, sage.rings.padics.local_generic_element, sage.arith.srange, sage.rings.padics.padic_generic_element, sage.rings.morphism, sage.rings.padics.common_conversion, sage.libs.pari.convert_gmp, sage.rings.finite_rings.finite_field_base, sage.rings.padics.padic_capped_relative_element, sage.rings.padics.padic_capped_absolute_element, sage.rings.padics.padic_floating_point_element, sage.rings.padics.padic_fixed_mod_element, sage.rings.polynomial.multi_polynomial, sage.cpython.wrapperdescr, sage.rings.fraction_field_element, sage.rings.real_double_element_gsl, sage.rings.real_double, sage.rings.function_field.element, sage.rings.function_field.element_rational, sage.rings.power_series_ring_element, sage.rings.polynomial.multi_polynomial_ring_base, sage.rings.polynomial.polynomial_element, sage.rings.finite_rings.element_pari_ffelt, sage.rings.finite_rings.element_givaro, sage.libs.mpmath.utils, sage.libs.pari.convert_sage_real_mpfr, sage.rings.real_mpfr, sage.rings.complex_conversion, sage.libs.pari.convert_sage_complex_double, sage.misc.parser, sage.rings.complex_double, sage.rings.complex_mpfr, sage.rings.complex_interval, sage.rings.convert.mpfi, sage.rings.real_mpfi, sage.rings.real_lazy, sage.groups.group, sage.matrix.args, sage.structure.coerce_actions, sage.modules.free_module_element, sage.modules.module, sage.matrix.constructor, sage.rings.number_field.number_field_morphisms, sage.rings.polynomial.evaluation_ntl, sage.rings.number_field.number_field_element, sage.rings.real_arb, sage.rings.polynomial.polynomial_complex_arb, sage.rings.complex_arb, sage.rings.number_field.number_field_element_quadratic, sage.rings.finite_rings.residue_field, sage.rings.padics.padic_printing, sage.rings.padics.padic_ext_element, sage.rings.padics.pow_computer_ext, sage.rings.padics.padic_ZZ_pX_element, sage.rings.padics.padic_ZZ_pX_FM_element, sage.rings.padics.padic_ZZ_pX_CR_element, sage.rings.padics.padic_ZZ_pX_CA_element, sage.libs.flint.fmpz_poly_sage, sage.rings.polynomial.evaluation_flint, sage.rings.polynomial.polynomial_integer_dense_flint, sage.rings.padics.pow_computer_flint, sage.rings.padics.qadic_flint_CR, sage.rings.padics.qadic_flint_CA, sage.rings.padics.qadic_flint_FP, sage.rings.padics.qadic_flint_FM, sage.rings.padics.pow_computer_relative, sage.rings.padics.relative_ramified_FP, sage.rings.padics.relative_ramified_FM, sage.rings.padics.relative_ramified_CR, sage.rings.padics.relative_ramified_CA, sage.sets.family, sage.rings.semirings.tropical_semiring, sage.rings.polynomial.laurent_polynomial, sage.structure.list_clone, sage.rings.polynomial.cyclotomic, sage.libs.flint.fmpq_poly_sage, sage.rings.polynomial.polynomial_rational_flint, sage.rings.power_series_poly, sage.rings.power_series_mpoly, sage.rings.laurent_series_ring_element, sage.rings.finite_rings.element_ntl_gf2e, sage.libs.singular.ring, sage.libs.singular.singular, sage.libs.singular.polynomial, sage.rings.noncommutative_ideals, sage.rings.polynomial.plural, sage.rings.polynomial.multi_polynomial_ideal_libsingular, sage.libs.singular.option, sage.libs.singular.function, sage.rings.polynomial.multi_polynomial_libsingular, sage.rings.complex_mpc, sage.rings.tate_algebra_element, sage.rings.puiseux_series_ring_element, sage.rings.bernmm, sage.rings.bernoulli_mod_p, sage.symbolic.function, sage.symbolic.expression, sage.symbolic.ring, sage.combinat.combinat_cython, sage.monoids.free_abelian_monoid_element, sage.quadratic_forms.quadratic_form__evaluate, sage.quadratic_forms.count_local_2, sage.algebras.quatalg.quaternion_algebra_element, sage.matrix.matrix0, sage.matrix.matrix1, sage.matrix.matrix2, sage.matrix.matrix_dense, sage.modules.vector_integer_dense, sage.arith.multi_modular, sage.modules.vector_modn_dense, sage.matrix.matrix_modn_dense_float, sage.matrix.matrix_modn_dense_double, sage.modules.vector_mod2_dense, sage.matrix.matrix_mod2_dense, sage.libs.pari.convert_flint, sage.libs.linbox.linbox_flint_interface, sage.libs.pari.convert_sage, sage.libs.pari.convert_sage_matrix, sage.matrix.matrix_integer_dense, sage.modules.vector_rational_dense, sage.matrix.matrix_rational_dense, sage.algebras.quatalg.quaternion_algebra_cython, sage.misc.search, sage.modular.modsym.p1list, sage.data_structures.blas_dict, sage.modules.with_basis.indexed_element, sage.misc.lazy_list, sage.misc.callable_dict, sage.combinat.words.word_datatypes, sage.combinat.words.word_char, sage.algebras.finite_dimensional_algebras.finite_dimensional_algebra_element, sage.algebras.clifford_algebra_element, sage.modular.arithgroup.arithgroup_element, sage.libs.gap.util, sage.libs.gap.libgap, sage.groups.perm_gps.permgroup_element, sage.sets.recursively_enumerated_set, sage.combinat.integer_lists.base, sage.combinat.integer_lists.invlex, sage.combinat.permutation_cython, sage.libs.gap.element, sage.groups.libgap_wrapper, sage.groups.matrix_gps.group_element_gap, sage.groups.matrix_gps.group_element, sage.modular.arithgroup.congroup, sage.modular.arithgroup.farey_symbol, sage.rings.polynomial.ore_polynomial_element, sage.rings.factorint, sage.graphs.base.c_graph, sage.graphs.base.graph_backends, sage.graphs.base.dense_graph, sage.graphs.base.static_sparse_backend, sage.graphs.base.static_sparse_graph, sage.graphs.generic_graph_pyx, sage.graphs.views, sage.graphs.distances_all_pairs, sage.graphs.base.boost_graph, sage.graphs.line_graph, sage.groups.perm_gps.partn_ref.data_structures, sage.sets.disjoint_set, sage.graphs.connectivity, sage.graphs.base.static_dense_graph, sage.graphs.path_enumeration, sage.graphs.graph_decompositions.slice_decomposition, sage.graphs.traversals, sage.graphs.independent_sets, sage.graphs.weakly_chordal, sage.graphs.asteroidal_triples, sage.graphs.graph_decompositions.rankwidth, sage.graphs.graph_decompositions.tree_decomposition, sage.graphs.graph_decompositions.fast_digraph, sage.graphs.graph_decompositions.vertex_separation, sage.graphs.graph_decompositions.clique_separators, sage.graphs.graph_decompositions.bandwidth, sage.graphs.graph_decompositions.cutwidth, sage.graphs.cliquer, sage.graphs.spanning_tree, sage.graphs.graph_decompositions.graph_products, sage.graphs.comparability, sage.graphs.isoperimetric_inequalities, sage.graphs.graph_coloring, sage.graphs.hyperbolicity, sage.graphs.chrompoly, sage.graphs.matchpoly, sage.numerical.backends.generic_backend, sage.graphs.convexity_properties, sage.sets.finite_set_map_cy, sage.probability.probability_distribution, sage.functions.prime_pi, sage.ext.fast_callable, sage.ext.interpreters.wrapper_rdf, sage.calculus.integration, sage.calculus.interpolation, sage.calculus.ode, sage.calculus.var, sage.rings.polynomial.pbori.pbori, sage.crypto.boolean_function, sage.crypto.sbox, sage.ext.fast_eval, sage.plot.plot3d.transform, sage.plot.plot3d.base, sage.plot.plot3d.index_face_set, sage.plot.plot3d.parametric_surface, sage.plot.plot3d.shapes, sage.combinat.expnums, sage.combinat.debruijn_sequence, sage.combinat.partitions, sage.libs.flint.arith_sage, sage.combinat.set_partition_iterator, sage.combinat.posets.hasse_cython, sage.combinat.enumeration_mod_permgroup, sage.geometry.abc, sage.geometry.triangulation.base, sage.dynamics.arithmetic_dynamics.projective_ds_helper, sage.quadratic_forms.ternary, sage.libs.mpmath.ext_impl, sage.libs.mpmath.ext_libmp, sage.libs.mpmath.ext_main, sage.matrix.matrix_sparse, sage.modules.vector_modn_sparse, sage.data_structures.binary_search, sage.modules.vector_integer_sparse, sage.matrix.matrix_modn_sparse, sage.matrix.matrix_integer_sparse, sage.combinat.root_system.reflection_group_c, sage.combinat.root_system.reflection_group_element, sage.algebras.fusion_rings.poly_tup_engine, sage.algebras.fusion_rings.shm_managers, sage.algebras.fusion_rings.fast_parallel_fmats_methods, sage.algebras.fusion_rings.fast_parallel_fusion_ring_braid_repn, sage.algebras.lie_algebras.lie_algebra_element, sage.algebras.octonion_algebra, sage.graphs.base.sparse_graph, sage.groups.perm_gps.partn_ref.automorphism_group_canonical_label, sage.groups.perm_gps.partn_ref.double_coset, sage.groups.perm_gps.partn_ref.canonical_augmentation, sage.groups.perm_gps.partn_ref.refinement_sets, sage.groups.perm_gps.partn_ref.refinement_graphs, sage.matrix.matrix_generic_dense, sage.libs.ecl, sage.geometry.toric_lattice_element, sage.geometry.point_collection, sage.algebras.letterplace.free_algebra_element_letterplace, sage.algebras.letterplace.free_algebra_letterplace, sage.matroids.set_system, sage.matroids.lean_matrix, sage.matroids.matroid, sage.misc.sage_ostools, sage.libs.eclib.mwrank, sage.libs.flint.fmpz_factor_sage, sage.libs.flint.qsieve_sage, sage.libs.giac.giac, sage.rings.number_field.totallyreal_data, sage.libs.pari.misc, sage.rings.number_field.totallyreal, sage.modular.modsym.apply, sage.matrix.misc_flint, sage.matrix.matrix_cyclo_dense, sage.modular.modsym.heilbronn, sage.modular.modform.eis_series_cython, sage.sat.solvers.satsolver, sage.schemes.hyperelliptic_curves.hypellfrob, ppl.congruence, ppl.constraint, ppl.linear_algebra, ppl.generator, ppl.mip_problem, ppl.polyhedron, ppl.bit_arrays, sage.rings.sum_of_squares, sage.graphs.strongly_regular_db, sage.graphs.generators.distance_regular, sage.groups.semimonomial_transformations.semimonomial_transformation, _brotli, zstandard.backend_c, sage.calculus.transforms.fft, sage.libs.gsl.array, sage.calculus.transforms.dwt, sage.calculus.riemann, sage.calculus.interpolators, sage.plot.complex_plot, sage.plot.plot3d.implicit_surface, sage.combinat.crystals.letters, sage.combinat.crystals.spins, sage.combinat.crystals.tensor_product_element, sage.combinat.rigged_configurations.rigged_partition, sage.combinat.crystals.pbw_datum, sage.combinat.matrices.dancing_links, sage.combinat.degree_sequences, sage.combinat.subword_complex_c, sage.numerical.mip, sage.lfunctions.zero_sums, sage.data_structures.list_of_pairs, sage.geometry.polyhedron.combinatorial_polyhedron.list_of_faces, sage.geometry.polyhedron.combinatorial_polyhedron.face_list_data_structure, sage.geometry.polyhedron.combinatorial_polyhedron.conversions, sage.geometry.polyhedron.combinatorial_polyhedron.polyhedron_face_lattice, sage.geometry.polyhedron.combinatorial_polyhedron.face_iterator, sage.geometry.polyhedron.combinatorial_polyhedron.combinatorial_face, sage.geometry.polyhedron.combinatorial_polyhedron.base, sage.dynamics.complex_dynamics.mandel_julia_helper, sage.numerical.backends.generic_sdp_backend, sage.numerical.linear_functions, sage.numerical.sdp, sage.modules.vector_numpy_dense, sage.modules.vector_double_dense, sage.modules.vector_real_double_dense, sage.stats.time_series, sage.stats.intlist, sage.matroids.basis_exchange_matroid, sage.matroids.circuits_matroid, sage.matroids.flats_matroid, sage.matroids.circuit_closures_matroid, sage.matroids.basis_matroid, sage.matroids.linear_matroid, sage.matroids.graphic_matroid, sage.libs.flint.flint_sage, sage.matrix.matrix_gap, cython.cimports.libc.math, scipy._lib._ccallback_c, lrcalc, sage.rings.ring_extension_conversion, sage.rings.ring_extension_morphism, sage.rings.ring_extension_element, sage.rings.ring_extension, sage.rings.function_field.element_polymod, sage.coding.ag_code_decoders, sage.coding.kasami_codes, sage.rings.polynomial.polynomial_gf2x, sage.rings.finite_rings.hom_finite_field, sage.libs.flint.ulong_extras_sage, sage.matrix.matrix_gf2e_dense, sage.combinat.designs.designs_pyx, sage.combinat.designs.gen_quadrangles_with_spread, sage.combinat.posets.hasse_cython_flint, fpylll.gmp.pylong, fpylll.numpy, fpylll.io, fpylll.fplll.gso, fpylll.util, fpylll.fplll.integer_matrix, fpylll.fplll.wrapper, fpylll.fplll.lll, fpylll.fplll.enumeration, fpylll.fplll.pruner, fpylll.config, fpylll.fplll.bkz_param, fpylll.fplll.bkz, fpylll.fplll.svpcvp, sage.stats.distributions.discrete_gaussian_integer, Cython.Utils, Cython.Plex.Actions, Cython.Plex.Transitions, Cython.Plex.Machines, Cython.Plex.DFA, Cython.Plex.Scanners, Cython.Compiler.Scanning, Cython.StringIOTree, Cython.Compiler.Code, Cython.Tempita._tempita, Cython.Compiler.Visitor, Cython.Compiler.Parsing, Cython.Compiler.FlowControl, _var_folders_0w_4z5l9vds32nbkz7l22n8j6s80000gn_T_tmpye96avd6_tmp_44ysg4l0_pyx_0, sage.numerical.backends.cvxopt_backend, sage.libs.braiding, sage.libs.homfly, primecountpy.primecount, scipy.special._ufuncs_cxx, scipy.special._ufuncs, scipy.special._specfun, scipy.special._comb, scipy.linalg._fblas, scipy.linalg._flapack, scipy.linalg.cython_lapack, scipy.linalg._cythonized_array_utils, scipy.linalg._solve_toeplitz, scipy.linalg._decomp_lu_cython, scipy.linalg._matfuncs_sqrtm_triu, scipy.linalg.cython_blas, scipy.linalg._matfuncs_expm, scipy.linalg._decomp_update, scipy.sparse._sparsetools, _csparsetools, scipy.sparse._csparsetools, scipy.sparse.linalg._dsolve._superlu, scipy.sparse.linalg._eigen.arpack._arpack, scipy.sparse.linalg._propack._spropack, scipy.sparse.linalg._propack._dpropack, scipy.sparse.linalg._propack._cpropack, scipy.sparse.linalg._propack._zpropack, scipy.sparse.csgraph._tools, scipy.sparse.csgraph._shortest_path, scipy.sparse.csgraph._traversal, scipy.sparse.csgraph._min_spanning_tree, scipy.sparse.csgraph._flow, scipy.sparse.csgraph._matching, scipy.sparse.csgraph._reordering, scipy.special._ellip_harm_2, sage.rings.polynomial.polynomial_real_mpfr_dense, sage.geometry.integral_points_integer_dense, scipy.integrate._odepack, scipy.integrate._quadpack, scipy.integrate._vode, scipy.integrate._dop, scipy.integrate._lsoda, scipy.optimize._group_columns, scipy._lib.messagestream, scipy.optimize._trlib._trlib, scipy.optimize._lbfgsb, _moduleTNC, scipy.optimize._moduleTNC, scipy.optimize._cobyla, scipy.optimize._slsqp, scipy.optimize._minpack, scipy.optimize._lsq.givens_elimination, scipy.optimize._zeros, scipy.optimize._highs.cython.src._highs_wrapper, scipy.optimize._highs._highs_wrapper, scipy.optimize._highs.cython.src._highs_constants, scipy.optimize._highs._highs_constants, scipy.linalg._interpolative, scipy.optimize._bglu_dense, scipy.optimize._lsap, scipy.spatial._ckdtree, scipy.spatial._qhull, scipy.spatial._voronoi, scipy.spatial._distance_wrap, scipy.spatial._hausdorff, scipy.spatial.transform._rotation, scipy.optimize._direct, sage.matroids.union_matroid, sage.matroids.extension, scipy.interpolate._fitpack, scipy.interpolate._dfitpack, scipy.interpolate._bspl, scipy.interpolate._ppoly, scipy.interpolate.interpnd, scipy.interpolate._rbfinterp_pythran, scipy.interpolate._rgi_cython, markupsafe._speedups, sage.modular.hypergeometric_misc, sage.modular.modform.l_series_gross_zagier_coeffs, sage.modular.modsym.manin_symbol, sage.modular.pollack_stevens.dist, sage.modules.vector_complex_double_dense, sage.numerical.linear_tensor_element, sage.data_structures.bounded_integer_sequences, sage.quivers.paths, sage.quivers.algebra_elements, zmq.backend.cython._zmq, tornado.speedups, psutil._psutil_osx, psutil._psutil_posix, sage.rings.polynomial.refine_root, sage.rings.polynomial.laurent_polynomial_mpair, sage.rings.polynomial.polynomial_integer_dense_ntl, sage.rings.polynomial.weil.weil_polynomials, sage.numerical.gauss_legendre, sage.schemes.toric.divisor_class, sage.stats.hmm.util, sage.stats.hmm.hmm, sage.stats.hmm.distributions, sage.stats.hmm.chmm, sage.structure.list_clone_demo (total: 590)
src/sage/combinat/sloane_functions.py

tobiasdiez added 18 commits December 29, 2023 11:29

Run pytest in conda ci

5fc47b2

Fix missing feature import errors in SageDoctestModule

a1f88a4

Skip when module not found error is raised during collection

af6959c

Fix pytest command in build and ci-conda workflows

36eea75

Update pytest options in build and ci-conda workflows to show summary…

bdfe4d8

… of errors and failures

Add rich output backend for doctest

fd809d9

Replace _get_runner with SageDocTestRunner in conftest.py

86defa1

Update pytest command to include verbose output

8a6995e

Add pytest-github-actions-annotate-failures to test dependencies

bf6ac0d

Only use sage spoofer if output file is specified

6c6582f

Always run pytest

96f9e58

Fix start_spoofing and stop_spoofing calls in SageDocTestRunner

038695a

Refactor exception printing to use short names instead of Sage's hack…

490146f

…y DoctestRunner

add missing imports

a94a678

Add imports to conftest.py

1c6fa26

revert changes to forker

ad7a14b

Fix a few display errors

6a77fd7

Merge branch 'develop' into pytest_replace_doctest

4d3f882

mkoeppe added the c: scripts label Feb 17, 2024

Merge branch 'develop' into pytest_replace_doctest

2666c6b

vbraun force-pushed the develop branch from eba5e19 to e5f42fa Compare June 3, 2024 22:15

Merge branch 'develop' into pytest_replace_doctest

fb70abe

github-actions bot added the s: needs review label Oct 30, 2024

tobiasdiez and others added 6 commits October 30, 2024 17:56

Run tests using pytest in meson workflow

8f8ff88

Merge branch 'develop' into pytest_replace_doctest

30a3af5

Merge branch 'develop' into pytest_replace_doctest

ba98646

Fix errors

4779f6c

Clarify todo

90af29a

Merge branch 'develop' into pytest_replace_doctest

749202e

tobiasdiez added 17 commits December 11, 2024 16:08

Fix meson run

d8ddedc

Fix deprecation warning capturing by printing to stdout by default

f86f833

Add missing variables to global namespace

c4210dd

Exclude test file

afb6cf9

Ignore more optional/executable files

9c231a9

Run tests in isolation

74520cb

Fix a few r-strings

6f9861f

Fix exception printing also in isolated mode

a3845f6

Ignore import errors also on meson

c781ad8

Set globals in pytests

678142d

Add more r-string

942db44

More renames

bd7ce3c

Merge remote-tracking branch 'upstream/develop' into pytest_replace_d…

92b162e

…octest

Reset name

31472b9

Due to sagemath#39144

fix test -> dummy

a016921

Try to fix CI

f69ec04

user202729 and others added 8 commits December 19, 2024 17:15

Add _make_named_class_key for FilteredModulesCategory

df6293f

Fix a few things

c6b3b55

Fix tests

c14e958

Merge branch 'pr/user202729/39160' into pytest_replace_doctest

775e4bb

No longer run isolated

3e2b0ee

Exclude more problematic files

13e9c3e

Move bitness check to doctest parser/output checker

83bf9aa

Move pytest config to root

366925f

tobiasdiez mentioned this pull request Dec 24, 2024

Ability to provide a custom doctest checker pytest-dev/pytest#13003

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Replace doctest runner by pytest in ci #36981

Replace doctest runner by pytest in ci #36981

tobiasdiez commented Dec 29, 2023 •

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tobiasdiez commented Dec 16, 2024

Replace doctest runner by pytest in ci #36981

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Replace doctest runner by pytest in ci #36981

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