Merge pull request #61 from SNLComputation/kuberry-changelog1.0.2

Added changes from 1.0.1 to 1.0.2

README.md

@@ -25,7 +25,7 @@ p^{*}& =& \underset{p \in V}{\text{arg min}}\;\frac{1}{2}\sum_{j=1}^N (\lambda_j
 [Recent Changes](doc/Changelog.md)
 
 ## Installation
-[Installation of Kokkos](doc/Kokkos-Install.md)
+[Installation of Kokkos](doc/Kokkos-Install.md) [Either automatically configured and built, or user installation location provided]
 
 [Installation of Compadre](doc/Compadre-Install.md)
 

doc/Changelog.md

@@ -1,4 +1,15 @@
 # Changelog
+## Changes in version 1.0.2 (changes from 1.0.1)
+- Kokkos source code now packaged in the toolkit, which is automatically configured and built. Users are still able to provide their own pre-built Kokkos install by specifying KokkosCore_PREFIX in CMake.
+- Added support for additional evaluation sites, which are sites that a polynomial reconstruction is to be evaluated, but is not the target site about which the polynomial reconstruction was made.
+- Exposed polynomial coefficients from the GMLS class through the Python interface.
+- Fixed Pthread detection from Kokkos configuration.
+- Added Python functions that generate neighbors lists and set the result in the GMLS class.
+- Defined a global ordinal (long long int) and cast to it before doing any pointer arithmetic for tiled matrix starting locations.
+- Added specification of a reference outward normal direction that is used to keep calculated outward normal vectors consistent [only relevant to manifold problems].
+- Made memory usage more efficient by calculating the maximum number of neighbors rather than using the neighbor list matrix dimension size.
+- Changed SamplingFunctionals from an ENUM with associated constexpr int arrays for characteristics to a constexpr struct that can be more easily extended by users.
+
 ## Changes in version 1.0.1 (changes from 1.0.0)
 - Fixed README.md and added installation instructions as their own .md file
 

doc/Kokkos-Install.md

@@ -1,4 +1,15 @@
 # Installing Kokkos
+
+There are two paths for providing a Kokkos installation, needed by the toolkit:
+
+# A.) Let Compadre Toolkit configure and build Kokkos
+
+Since the source code for Kokkos is now bundled with the Compadre Toolkit, users can simply leave the CMake variable KokkosCore_PREFIX="" and optionally provide a few configuration details via KokkosCore_FLAGS and KokkosCore_ARCH. 
+
+Valid choices for KokkosCore_ARCH can be found in kokkos/cmake/kokkos_options.cmake and should be semicolon separated.
+
+# or B.) Installing Kokkos from source and providing the location to the toolkit
+
 1.) Download Kokkos from github via:
 
 ```