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change DEVISER to Deviser
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Sarah Keating committed May 21, 2015
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16 changes: 8 additions & 8 deletions README.md
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##DEVISER
##Deviser



*DEVISER* stands for *"Design Explorer and
*Deviser* stands for *"Design Explorer and
Viewer for Iterative SBML Enhancement of Representations"*.


Expand All @@ -28,14 +28,14 @@ Computation modeling has become a crucial aspect of biological research, and [SB
[LibSBML](http://sbml.org/Software/libSBML) is a free, open-source programming library to help you read, write, manipulate, translate, and validate SBML files and data streams. Support for SBML Level 3 packages can be added by integrating
the package specific code and building with the package enabled.

SBML Level 3 is being developed as a core with additional optional packages. DEVISER facilitates the development of these packages by providing a means of creating a basic specification, UML diagrams and code for integration with libSBML.
SBML Level 3 is being developed as a core with additional optional packages. Deviser facilitates the development of these packages by providing a means of creating a basic specification, UML diagrams and code for integration with libSBML.


DEVISER is written in Python and is compatible with Python version 2.6 onwards.
Deviser is written in Python and is compatible with Python version 2.6 onwards.



## Using DEVISER ##
## Using Deviser ##

The Deviser Edit tool allows you to quickly define an SBML L3 package. It then provides the following functionality

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deviser.py [--generate][--latex] input-file.xml

This program will use a DEVISER xml file, and generate either a C++
This program will use a Deviser xml file, and generate either a C++
libSBML extension for it, or generate a LaTeX scaffold for its
specification.

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## Other resources ##

Not all of the following are necessary as what is necessary depends on which operating system is being used and which DEVISER functionality is required. These links are given as a quick reference.
Not all of the following are necessary as what is necessary depends on which operating system is being used and which Deviser functionality is required. These links are given as a quick reference.

[libSBML source code](https://sourceforge.net/projects/sbml/files/libsbml/5.11.4/stable/libSBML-5.11.4-core-src.tar.gz/download)

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## Acknowledgments ##

We achnowledge funding for DEVISER from the National Institutes of Health (USA) under
We achnowledge funding for Deviser from the National Institutes of Health (USA) under
grant R01 GM070923.


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