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@sib-swiss

SIB Swiss Institute of Bioinformatics

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  1. training-collection training-collection Public

    Collection of bioinformatics training materials

    Python 983 182

  2. single-cell-training single-cell-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    R 78 37

  3. intermediate-python-training intermediate-python-training Public

    Jupyter Notebook 63 26

  4. first-steps-with-python-training first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    Jupyter Notebook 54 16

  5. first-steps-with-R-training first-steps-with-R-training Public

    repository of the 2-day course "First steps with R in Life Sciences" from SIB-training

    R 42 12

  6. intro-machine-learning-training intro-machine-learning-training Public

    Jupyter Notebook 38 15

Repositories

Showing 10 of 122 repositories
  • single-cell-python-training Public
    sib-swiss/single-cell-python-training’s past year of commit activity
    HTML 1 CC-BY-4.0 0 0 0 Updated Nov 24, 2024
  • spatial-transcriptomics-training Public
    sib-swiss/spatial-transcriptomics-training’s past year of commit activity
    R 2 CC-BY-4.0 1 1 0 Updated Nov 24, 2024
  • glittr-stats Public

    General statistics of Glittr.org. Comes with the manuscript.

    sib-swiss/glittr-stats’s past year of commit activity
    PostScript 0 0 0 0 Updated Nov 24, 2024
  • sparql-examples-utils Public Forked from sib-swiss/sparql-examples

    A tool to maintain and test your SPARQL examples

    sib-swiss/sparql-examples-utils’s past year of commit activity
    Java 3 10 13 2 Updated Nov 23, 2024
  • kgsteward Public

    Knwowledge Graph Steward - Command line tool to help manage RDF store (GraphDB)

    sib-swiss/kgsteward’s past year of commit activity
    Python 5 GPL-3.0 2 0 1 Updated Nov 23, 2024
  • sparql-editor Public

    💫 A standard web component to deploy a user-friendly SPARQL query editor for one or more endpoints. Built on the popular YASGUI editor, it provides context-aware autocomplete for classes and predicates based on the content of the endpoints.

    sib-swiss/sparql-editor’s past year of commit activity
    TypeScript 3 MIT 0 4 0 Updated Nov 22, 2024
  • NGS-introduction-training Public

    SIB course that introduces analysis of NGS data

    sib-swiss/NGS-introduction-training’s past year of commit activity
    Shell 15 CC-BY-4.0 12 4 0 Updated Nov 22, 2024
  • sparql-llm Public

    🦜✨ Chat system and reusable components to improve LLMs capabilities when generating SPARQL queries

    sib-swiss/sparql-llm’s past year of commit activity
    Jupyter Notebook 7 MIT 1 1 0 Updated Nov 22, 2024
  • sendcrypt Public

    Modern and easy to use client to securely send encrypted sensitive data by SFTP. Linux, MacOS, and Windows.

    sib-swiss/sendcrypt’s past year of commit activity
    TypeScript 1 MIT 0 2 0 Updated Nov 22, 2024
  • intermediate-python-training Public
    sib-swiss/intermediate-python-training’s past year of commit activity
    Jupyter Notebook 63 CC-BY-4.0 26 4 1 Updated Nov 21, 2024
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