archive rehome script (PR 8 of N) #84
Workflow file for this run
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name: python-tiledbsoma-ml CI | |
on: | |
pull_request: | |
branches: ["**"] | |
paths-ignore: | |
- "scripts/**" | |
- "notebooks/**" | |
push: | |
branches: [main] | |
paths-ignore: | |
- "scripts/**" | |
- "notebooks/**" | |
workflow_dispatch: | |
jobs: | |
lint: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: "3.11" | |
- name: Restore pre-commit cache | |
uses: actions/cache@v4 | |
with: | |
path: ~/.cache/pre-commit | |
key: pre-commit-${{ hashFiles('.pre-commit-config.yaml') }} | |
- name: Install pre-commit | |
run: pip -v install pre-commit | |
- name: Run pre-commit hooks on all files | |
run: pre-commit run -v -a | |
tests: | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ["3.9", "3.10", "3.11", "3.12"] | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
cache: pip | |
- name: Install prereqs | |
run: | | |
pip install --upgrade pip wheel pytest pytest-cov setuptools | |
pip install . | |
- name: Run tests | |
run: pytest -v --cov=src --cov-report=xml tests | |
build: | |
# for now, just do a test build to ensure that it works | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: "3.11" | |
- name: Do build | |
run: | | |
pip install --upgrade build pip wheel setuptools setuptools-scm | |
python -m build . |