Type-fixes / errata #65
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: python-tiledbsoma-ml past tiledbsoma compat # Latest tiledbsoma version covered by another workflow | |
| on: | |
| pull_request: | |
| branches: ["**"] | |
| paths-ignore: | |
| - CHANGELOG.md | |
| - README.md | |
| - "scripts/**" | |
| - "notebooks/**" | |
| push: | |
| branches: [main] | |
| paths-ignore: | |
| - CHANGELOG.md | |
| - README.md | |
| - "scripts/**" | |
| - "notebooks/**" | |
| workflow_dispatch: | |
| jobs: | |
| unit_tests: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest"] # could add 'macos-latest', but the matrix is already huge... | |
| python-version: ["3.9", "3.10", "3.11"] # TODO: add 3.12 when tiledbsoma releases wheels for it. | |
| pkg-version: | |
| - "tiledbsoma~=1.9.0 'numpy<2.0.0'" | |
| - "tiledbsoma~=1.10.0 'numpy<2.0.0'" | |
| - "tiledbsoma~=1.11.0" | |
| - "tiledbsoma~=1.12.0" | |
| - "tiledbsoma~=1.13.0" | |
| - "tiledbsoma~=1.14.0" | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: pip | |
| - name: Install prereqs | |
| run: | | |
| pip install --upgrade pip pytest setuptools | |
| pip install ${{ matrix.pkg-version }} . | |
| - name: Run tests | |
| run: pytest -v tests |