remove anyCPU

library spectrum is child class of mzspectrum spectrum match from tsv now abstract class
smith-chem-wisc · Nov 29, 2023 · 9bce908 · 9bce908
1 parent 015ec82
commit 9bce908
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Showing 4 changed files with 4 additions and 104 deletions.
diff --git a/mzLib/MassSpectrometry/MzSpectra/MzSpectrum.cs b/mzLib/MassSpectrometry/MzSpectra/MzSpectrum.cs
@@ -86,6 +86,7 @@ static MzSpectrum()
             }
         }
 
+        public MzSpectrum(){}
         public MzSpectrum(double[,] mzintensities)
         {
             var count = mzintensities.GetLength(1);

diff --git a/mzLib/Omics/SpectrumMatch/LibrarySpectrum.cs b/mzLib/Omics/SpectrumMatch/LibrarySpectrum.cs
@@ -1,11 +1,12 @@
 using System.Text;
 using Easy.Common.Extensions;
+using MassSpectrometry;
 using MassSpectrometry.MzSpectra;
 using Omics.Fragmentation;
 
 namespace Omics.SpectrumMatch
 {
-    public class LibrarySpectrum
+    public class LibrarySpectrum : MzSpectrum
     {
         public string Sequence { get; set; }
         public double? RetentionTime { get; set; }

diff --git a/mzLib/Omics/SpectrumMatch/SpectrumMatchFromTsv.cs b/mzLib/Omics/SpectrumMatch/SpectrumMatchFromTsv.cs
@@ -7,7 +7,7 @@
 
 namespace Omics.SpectrumMatch
 {
-    public class SpectrumMatchFromTsv
+    public abstract class SpectrumMatchFromTsv
     {
         protected static readonly Regex PositionParser = new Regex(@"(\d+)\s+to\s+(\d+)");
         protected static readonly Regex VariantParser = new Regex(@"[a-zA-Z]+(\d+)([a-zA-Z]+)");
@@ -62,9 +62,6 @@ public class SpectrumMatchFromTsv
         /// All parsing should take place within the derived class constructurs
         /// TODO: Reconsider this once osmtsv is added
         /// </summary>
-        public SpectrumMatchFromTsv()
-        {
-        }
 
         //Used to remove Silac labels for proper annotation
         public static string RemoveParentheses(string baseSequence)

diff --git a/mzLib/mzLib.sln b/mzLib/mzLib.sln
@@ -37,203 +37,104 @@ Project("{9A19103F-16F7-4668-BE54-9A1E7A4F7556}") = "Omics", "Omics\Omics.csproj
 EndProject
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 	EndGlobalSection
-Original file line number
+Diff line change
@@ Expand Up / @@ -86,6 +86,7 @@ static MzSpectrum() @@
                 }
             }
+            public MzSpectrum(){}
             public MzSpectrum(double[,] mzintensities)
             {
                 var count = mzintensities.GetLength(1);
@@ Expand Down @@