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688 Open 1,026 Closed
688 Open 1,026 Closed
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Issues list

revindex database locations on farm fyi Information that is interesting or useful
#3467 opened Jan 2, 2025 by ctb
avoid rocksdb recompiles?
#3466 opened Jan 2, 2025 by ctb
two revindex/RocksDB questions that I would like to investigate
#3462 opened Dec 29, 2024 by ctb
update betterplot plugin to allow empty names (and then use filenames)
#3461 opened Dec 28, 2024 by ctb
update betterplot plugin to give better error message on various input issues
#3460 opened Dec 28, 2024 by ctb
consider sketching the hungate collection
#3459 opened Dec 28, 2024 by ctb
fix abundhist plugin to autodetect flat sketches and complain
#3458 opened Dec 28, 2024 by ctb
min python version for screed on conda-forge: should I just set at py310?
#3455 opened Dec 25, 2024 by ctb
document and test skipmer moltypes
#3449 opened Dec 20, 2024 by bluegenes
validate amino acid inputs rust
#3447 opened Dec 20, 2024 by bluegenes
switch to using importlib.metadata instead of pkg_resources
#3440 opened Dec 16, 2024 by ctb
database page update thoughts
#3421 opened Dec 7, 2024 by ctb
5 tasks
zenodo did not update for sourmash v4.8.11 and sourmash v4.8.12
#3420 opened Dec 6, 2024 by ctb
sourmash v4.8.12 release
#3419 opened Dec 6, 2024 by ctb
11 of 15 tasks
1
regular test failures on py310?
#3410 opened Dec 2, 2024 by ctb
add rust sig building utilities rust
#3406 opened Nov 20, 2024 by bluegenes
wasm sketching sets null filename and missing name.
#3405 opened Nov 20, 2024 by mr-eyes
write up rationale for .sig.zip files over JSON files
#3400 opened Nov 16, 2024 by ctb
adjust ZipStorage::from_file to pass errors up on bad zip file
#3398 opened Nov 14, 2024 by ctb
Build Custom Database
#3396 opened Nov 13, 2024 by agombolay
2
Saving extra metadata in signature format
#3371 opened Nov 4, 2024 by mr-eyes
6
in debian build, disabling branchwater feature leads to Python test error: symbol 'revindex_free' not found in library … _lowlevel.so: undefined symbol: revindex_free
#3365 opened Oct 28, 2024 by mr-c
7
improve sourmash tax metagenome lingroup output 5.0 issues to address for a 5.0 release
#3361 opened Oct 24, 2024 by bluegenes
create a downsampled iterator so that downsampling becomes less dependent on clone
#3355 opened Oct 15, 2024 by ctb
2
workflow to convert (many) .sig/.sig.gz files to .sig.zip files + mf.csv files code herein lies code
#3349 opened Oct 13, 2024 by ctb
1
ProTip! Updated in the last three days: updated:>2025-01-02.