Fix assay_comparison and ISS notebooks (#698)

Both notebooks had datasets where the tile shapes were not consistently provided. spacetx/slicedimage#72 broke the recording of the tile shape, and spacetx/slicedimage#73 fixes it. Test plan: `make -j run__notebooks/py/ISS_Pipeline_-_Breast_-_1_FOV.py run__notebooks/py/assay_comparison.py`
spacetx · Oct 11, 2018 · 0b9c84d · 0b9c84d
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commit 0b9c84d
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diff --git a/REQUIREMENTS-DEV.txt b/REQUIREMENTS-DEV.txt
@@ -82,7 +82,7 @@ semantic-version==2.6.0
 showit==1.1.4
 simplegeneric==0.8.1
 six==1.11.0
-slicedimage==1.0.0
+slicedimage==1.0.1
 snowballstemmer==1.2.1
 Sphinx==1.8.0
 sphinx-rtd-theme==0.4.1

diff --git a/REQUIREMENTS.txt b/REQUIREMENTS.txt
@@ -37,7 +37,7 @@ seaborn==0.9.0
 semantic-version==2.6.0
 showit==1.1.4
 six==1.11.0
-slicedimage==1.0.0
+slicedimage==1.0.1
 toolz==0.9.0
 tqdm==4.26.0
 trackpy==0.4.1

diff --git a/REQUIREMENTS.txt.in b/REQUIREMENTS.txt.in
@@ -13,7 +13,7 @@ scikit-learn
 scipy
 seaborn
 showit >= 1.1.4
-slicedimage == 1.0.0
+slicedimage == 1.0.1
 scikit-learn
 tqdm
 trackpy

diff --git a/setup.py b/setup.py
@@ -18,7 +18,7 @@
 
 setuptools.setup(
     name="starfish",
-    version="0.0.25",
+    version="0.0.26",
     description="Pipelines and pipeline components for the analysis of image-based transcriptomics data",
     author="Deep Ganguli",
     author_email="dganguli@chanzuckerberg.com",