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Achievements

Achievement: Pull SharkAchievement: QuickdrawAchievement: YOLOAchievement: Starstruck

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  1. epigen/MrBiomics epigen/MrBiomics Public

    MrBiomics: Modules & Recipes augment Bioinformatics for Multi-Omics Analyses

    Python 41 1

  2. OpenBioLink/SimulateGPT OpenBioLink/SimulateGPT Public

    Large language models as universal biomedical simulators

    R 14 2

  3. epigen/atacseq_pipeline epigen/atacseq_pipeline Public

    Ultimate ATAC-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.

    Python 48 2

  4. epigen/unsupervised_analysis epigen/unsupervised_analysis Public

    A general purpose Snakemake workflow and MrBiomics module to perform unsupervised analyses (dimensionality reduction & cluster analysis) and visualizations of high-dimensional data.

    Python 26 4

  5. epigen/dea_limma epigen/dea_limma Public

    A Snakemake workflow and MrBiomics module for performing and visualizing differential (expression) analyses (DEA) on NGS data powered by the R package limma.

    R 24 2

  6. epigen/enrichment_analysis epigen/enrichment_analysis Public

    A Snakemake workflow and MrBiomics module for performing genomic region set and gene set enrichment analyses using LOLA, GREAT, GSEApy, pycisTarget and RcisTarget.

    Python 32 2