.pre-commit-config.yaml

repos:
  - repo: https://github.com/Yelp/detect-secrets.git
    rev: v1.4.0
    hooks:
      - id: detect-secrets
        args: [--baseline, .secrets.baseline, --exclude-files, 'genome\/', --exclude-files, 'dataset\/']
        exclude: package-lock.json

  # for Proteinpaint, the team preference is for the prettier formatting
  # to be applied as part of the commit, not as a separate commit
  # prior to the code change commit. The bash entry below does this, but
  # seems to trigger CI errors if included in this config, so we will 
  # trigger prettier separately from this yaml
  # 
  # - repo: https://github.com/pre-commit/mirrors-prettier
    # rev: v2.7.1 # Use the sha or tag you want to point at
    # hooks:
      # - id: prettier
        # non-recommended entry by pre-commit maintener, https://stackoverflow.com/a/64309843/1146018
        # ideally, a separate commit for code formatting, but much simpler 
        # to trigger formatting and re-staging as part of commit
        # entry: bash -c 'npx prettier --write .; git add -u' --