Merge pull request #79 from the-virtual-brain/EBR-40

WIP: EBR-40 rebuild tvb-gdist with latest versions

.github/workflows/tests.yml

@@ -6,25 +6,25 @@ env:
   COVERAGE: 1
 
 jobs:
-  run_tests_py_3_10:
+  run_tests:
     name: Run tests on ${{ matrix.os }} with python ${{ matrix.python-version }}
     runs-on: ${{ matrix.os }}
     strategy:
       matrix:
-        os: [ ubuntu-20.04, windows-2019, macOS-11 ]
+        os: [ ubuntu-latest, windows-latest, macOS-13 ]
         python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
-      - uses: actions/setup-python@v4
+      - uses: actions/setup-python@v5
         with:
           python-version: ${{ matrix.python-version }}
 
       - name: Install dependencies
         run: |
             python -m pip install --upgrade pip
-            pip install pytest pytest-cov
+            pip install setuptools pytest pytest-cov
 
       - name: Install project
         run:  |
@@ -36,7 +36,7 @@ jobs:
           pytest --junitxml=results.xml --cov
 
       - name: Run Coverage Generation
-        if: matrix.os == 'ubuntu-20.04'
+        if: ${{ startsWith(matrix.os, 'ubuntu') }}
         run: |
           sudo chmod +x cppci.sh
           ./cppci.sh

.github/workflows/wheels.yml

@@ -10,16 +10,16 @@ jobs:
     runs-on: ${{ matrix.os }}
     strategy:
       matrix:
-        os: [ubuntu-20.04, windows-2019, macOS-11]
+        os: [ubuntu-latest, windows-latest, macOS-13]
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       # Used to host cibuildwheel
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v5
 
       - name: Install cibuildwheel
-        run: python -m pip install cibuildwheel==2.11.3
+        run: python -m pip install setuptools cibuildwheel==2.11.3
 
       - name: Build wheels
         run: python -m cibuildwheel --output-dir wheelhouse
@@ -36,7 +36,7 @@ jobs:
     name: Build source distribution
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - name: Build sdist
         run: pipx run build --sdist

setup.py

@@ -103,7 +103,7 @@ def finalize_options(self):
 
 setuptools.setup(
     name="tvb-" + GEODESIC_NAME,
-    version="2.2",
+    version="2.2.1",
     ext_modules=GEODESIC_MODULE,
     include_dirs=INCLUDE_DIRS,
     cmdclass={"build_ext": new_build_ext},