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45 Open 285 Closed
45 Open 285 Closed
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Issues list

Full rank initializers
#734 opened Jul 10, 2024 by MUCDK
output the raw cell transition data without aggregation
#733 opened Jul 10, 2024 by Xian123123123
2
.impute consumes too much memory
#729 opened Jul 5, 2024 by Marius1311
@giovp @michalk8 @MUCDK
2
Plotting Tests Fail bug (not-urgent) Something isn't working; is not urgent to fix ci Continuous integration improvements test Improve or add new tests
#727 opened Jul 3, 2024 by selmanozleyen
Add Elastic Costs again or asses if they are necessary or not
#726 opened Jul 3, 2024 by selmanozleyen
2
check for warnings thrown by us test Improve or add new tests
#721 opened Jul 2, 2024 by MUCDK
check for unrecognized in solve methods enhancement New feature or request
#720 opened Jul 2, 2024 by MUCDK
Refactor: Maybe GW should inherit from FGW instead of vice versa
#716 opened Jun 14, 2024 by selmanozleyen
2
Refactor: Check if both x and x_callback is given
#715 opened Jun 14, 2024 by selmanozleyen
adapt user guide
#711 opened Jun 11, 2024 by MUCDK
@ArinaDanilina
describe birth death process better
#708 opened Jun 6, 2024 by MUCDK
@ArinaDanilina
1
adapt low rank gamma default for linear problems
#705 opened May 29, 2024 by MUCDK
@MUCDK
1
check the convergence flag
#703 opened May 28, 2024 by MUCDK
@MUCDK
LineageProblem error
#694 opened May 16, 2024 by Marius1311
@MUCDK
3
Unbalance FGW full rank marginal normalization issue
#691 opened Apr 30, 2024 by giovp Fixes for FGW full rank
No convergence with new commit of ottjax in LRGW solvers unless inner_iterations=10 is set
#678 opened Mar 20, 2024 by selmanozleyen
@selmanozleyen
3
make example how to use graphs
#663 opened Mar 5, 2024 by MUCDK
@ArinaDanilina
SinkhornProblem star policy wrong problem order
#650 opened Jan 29, 2024 by ArinaDanilina
@selmanozleyen
3
Add examples for advanced data passing, e.g. how to pass x_attr/y_attr
#643 opened Jan 8, 2024 by MUCDK
@ArinaDanilina
2
change batch_size in sparsify
#639 opened Dec 14, 2023 by MUCDK
@selmanozleyen
11
Exhaust memory when using Eucidean cost.
#635 opened Dec 7, 2023 by Chengwei94
@ArinaDanilina
3
Improve code quality in tests test_pass_arguments
#615 opened Oct 9, 2023 by MUCDK
@ArinaDanilina
symbol column key argument when using gene sets
#608 opened Sep 26, 2023 by ivirshup
@MUCDK
1
cell_transition changed bug Something isn't working
#604 opened Sep 13, 2023 by MUCDK
1
@MUCDK
Add .copy method
#601 opened Sep 5, 2023 by Marius1311
1
@michalk8 @MUCDK
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