Single-cell RNA sequencing typos (#277) #1088
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Build book | |
| on: [push, pull_request] | |
| jobs: | |
| build-book: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python 3.11 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.11" | |
| - name: Setup environment | |
| run: | | |
| pip install uv | |
| uv pip install --system jupyter-book jupytext beautifulsoup4 | |
| - name: Cache jupyter-cache folder | |
| uses: actions/cache@v2 | |
| env: | |
| cache-name: jupyter-cache | |
| with: | |
| path: jupyter-book/_build/.jupyter_cache | |
| key: v1-${{ github.ref }}-${{ hashFiles('notebook_scripts/**/*.py') }} | |
| restore-keys: | | |
| v1-${{ github.ref }}-${{ hashFiles('notebook_scripts/**/*.py') }} | |
| v1-${{ github.ref }} | |
| v1-refs/heads/master | |
| - name: Build the JupyterBook | |
| run: make | |
| pdfhtml: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python 3.11 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.11" | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --upgrade uv | |
| uv pip install --system jupyter-book jupytext beautifulsoup4 | |
| - name: Install Headless Chrome dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -yq $(cat .github/workflows/pyppeteer_requirements.txt) | |
| - name: Install Chromium | |
| run: uv pip install --system pyppeteer | |
| - name: Build PDF from HTML (Docs) | |
| run: make pdf | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| name: PDF_HTML | |
| path: jupyter-book/_build/pdf/book.pdf |